LOCUS       XM_039094078             456 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 40S ribosomal protein S16-like
            (LOC102548369), mRNA.
ACCESSION   XM_039094078
VERSION     XM_039094078.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039094078.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..456
                     /gene="LOC102548369"
                     /note="40S ribosomal protein S16-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 33 Proteins, and 88% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:102548369"
                     /db_xref="RGD:7517571"
     CDS             16..456
                     /gene="LOC102548369"
                     /codon_start=1
                     /product="40S ribosomal protein S16-like"
                     /protein_id="XP_038950006.1"
                     /db_xref="GeneID:102548369"
                     /db_xref="RGD:7517571"
                     /translation="MPSKGPLQSVQVFGCKKTATAVAHCKGGNGLIKVNGRSLEMIEL
                     CTLQYKLLEPVLHLGKERFAGVDIQVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDE
                     ASKKEIKDILIQYNPTLPVADPRRCESKKFGSPGARALYQKSYR"
ORIGIN      
        1 ttcatacttg tagctatgcc gtccaagggt ccgctgcagt ccgtgcaagt cttcggatgc
       61 aagaagacag ccacagccgt ggcccactgc aaaggaggaa atgggctcat caaggtgaat
      121 ggccgttccc tggagatgat cgagctgtgc acgctgcagt acaagttact ggagcctgtt
      181 ttgcatctgg gcaaggagag atttgctggt gtggatatcc aggtccgtgt gaagggtggt
      241 ggtcatgtgg cccaaattta tgctatccgg cagtccatct caaaagctct ggtggcttat
      301 taccaaaaat atgtggatga agcctctaag aaggagatca aagatatcct catccagtac
      361 aatccgaccc tgcctgtagc tgacccccgt cgctgcgaat ccaaaaagtt tggcagtccc
      421 ggtgcccgtg ccctgtacca gaaatcctac cgataa
//
