LOCUS       XM_017601151            2022 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus peroxisomal biogenesis factor 19-like
            (LOC102548286), mRNA.
ACCESSION   XM_017601151
VERSION     XM_017601151.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2022
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2022
                     /gene="LOC102548286"
                     /note="peroxisomal biogenesis factor 19-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 ESTs, 2 long SRA reads, 12 Proteins, and 96%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:102548286"
                     /db_xref="RGD:7538513"
     CDS             1..1032
                     /gene="LOC102548286"
                     /codon_start=1
                     /product="peroxisomal biogenesis factor 19"
                     /protein_id="XP_017456640.1"
                     /db_xref="GeneID:102548286"
                     /db_xref="RGD:7538513"
                     /translation="MVREAIRVYVGAGAQEDQEPSLSALKYDCDSSSQRVHATDKSRV
                     LEQDGGCCGAGVEADRELEELLESALDDFDKAKPSPAPSPTISAPDASGPQKRSPGDT
                     AKDALFASQEKFFQELFDSELASQATAEFEKAMKELAEEEPHLVEQFQKLSEAAGRVG
                     SDASSQQEFTSCLKETLSGLAKNATDLQNAGMSEEELTKAMEGLGMDEGDGEGNILPI
                     MQSLMQNLLSKDVLYPSLKEITEKYPEWLQSHQESIPPEQFEKYQQQHSVMGKICEQF
                     EAETPTDSEATHRARFEAVLDLMQQLQDLGHPPKELAGEMPPGLNFDLDALNLSGPPG
                     ANGEQCLIM"
ORIGIN      
        1 atggtcaggg aggccattag agtctatgtt ggggcaggtg ctcaggaaga ccaagagcct
       61 agtttgtctg ctctgaagta tgactgtgac tctagctctc aaagggttca tgctaccgat
      121 aaaagcagag tcctcgagca agatggcggc tgttgcggtg ctggagtcga agcggaccgg
      181 gaattggagg agcttttaga aagtgctctt gatgattttg ataaagccaa accctcccca
      241 gcaccctctc ctaccatctc ggcccccgat gcttcagggc cccagaagag atcgccagga
      301 gacactgcca aagatgctct ctttgcctcc caagagaaat ttttccagga actgttcgac
      361 agtgagctgg cttcccaagc caccgcagag tttgagaagg caatgaagga gctggctgag
      421 gaagagcccc atctggtgga gcagttccag aagctctcag aggcagctgg gagagtgggc
      481 agcgatgcaa gttctcaaca agaatttact tcttgcctaa aggagacatt aagtgggcta
      541 gccaaaaatg ccactgacct tcagaacgca ggcatgtctg aagaagaact gacgaaagcc
      601 atggaagggc tgggcatgga tgaaggagac ggggaaggga acattctccc catcatgcag
      661 agcctcatgc agaacctctt gtctaaggat gtattgtatc catccctgaa ggagatcacc
      721 gaaaagtatc cagaatggct acagagtcac caggagtcta ttcccccaga gcagtttgag
      781 aagtatcagc agcagcacag tgtcatgggc aaaatctgcg agcagttcga ggcagagacg
      841 cccacagaca gcgaggctac tcacagggct cgctttgagg cggtactcga tcttatgcag
      901 cagttacagg acttgggcca ccctccgaaa gagctggctg gggagatgcc tcctggcctc
      961 aactttgacc tggatgccct caatctatcg ggcccaccag gtgctaatgg cgaacagtgt
     1021 ctgatcatgt gaaacacaac acggtttcct ccctgagtcc cagccatggg gaacatctgg
     1081 aatcaacaga gtcactggga actgaggcag gagtatcatc cgtgggagct gctgccccac
     1141 actctctaca tcccattcaa gactgtgcca taccagctga ggacctgttg taggcctttt
     1201 ctatgagccc tactccatta tggtgtctgc tgttagaaac gggccaatta tttgctaggt
     1261 gaaggaaggc atcccttgtg gggcatttta cttcttccca ctctccaaaa taatgttaca
     1321 tgtggtggta ctcatgttcc ccttgattcc cagggacttt gtgccttgtt tctactccct
     1381 cccttgtgtc tgggagcaag agctaagtcc taagactgct cttctcttag gcagggcctc
     1441 tgggaatgag gagaaagtag cctgggtggg gctggaggct tgtcacagta tctgctagcc
     1501 ttcttttgga attctccgaa gggaaaggaa ttttgcactt agcaggttga aagcaaagcc
     1561 ttgggcattt cctgtcctta ggtgctgcgc cctaattccc ctttcctcct gagagctcaa
     1621 gttgataccc tggttctttc tacaactcca tgatttaggg gacccccgct cttgactttg
     1681 ctttgcccca tgactatcct tacctcctct ctttagagtc ttatttattc cgctcttttt
     1741 aactagggct gtgatggatg gaggctaatc ttgtttcctt tcatctagta cctggaccat
     1801 tctcactaga cccttctctg cctctttggc caacacatac ttgtggtgtc agatctggta
     1861 catgaatggc cattctaccc agatagattt tggtttattt aagacatcag attccctaga
     1921 atccttggtt caggaaggcg cttgggaaag gggtgtagcc agattctttt ttttcctgca
     1981 agccccatgg ggcagtgtcc aataaatatt ctgacgagcg tg
//
