LOCUS       XM_039094158            7023 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102548067
            (LOC102548067), transcript variant X1, mRNA.
ACCESSION   XM_039094158
VERSION     XM_039094158.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039094158.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7023
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7023
                     /gene="LOC102548067"
                     /note="uncharacterized LOC102548067; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:102548067"
                     /db_xref="RGD:7545650"
     CDS             123..1757
                     /gene="LOC102548067"
                     /codon_start=1
                     /product="putative POTE ankyrin domain family member M
                     isoform X1"
                     /protein_id="XP_038950086.1"
                     /db_xref="GeneID:102548067"
                     /db_xref="RGD:7545650"
                     /translation="MFSTLRKLCCFKREPKTPLGFCDGPSNREGSLACCDCSHEDKYG
                     HSYDPDNKFHEAVCMGKIKVVLHLLSKKKFSINDTDKGKRTALHFACFYGHLHLVQFL
                     LYNDCMINALDDQKATPLMKAVQSWETKIASVLLDNGANPNCKDSNGETALHQAVYVD
                     SPDIAASLLEYGADIEETTKDGFTPLLLALRERKLLTAEYLIKHGANIYARDDYQRTT
                     LMYAVQWDSEVIVEQLLEKGIDHSLKDSFGWSALQYAVAGKRKVKDIILDYEDSLLLS
                     QHSIFTGNLHADFYSSGYGFRSESLISMCSREEDEYYSEIQQDIPENIMENGVDDLPE
                     ASKIYDAVEEQKEELGLETVLDLKLENKDICHKNEEYQNLNTSRKAVHSYNTGNGTDN
                     NETSQVWADKCPHPETRDYSHPIYKPKSESQQSQPDIDLSEELEEEISESKLESERSF
                     HKGAEIQGFSVSNSNGLHENSTEVPHSSNMYNNAEKKVIKLLEKKSTMEDKIQTSEEE
                     EQNTVRTSKRPLIHTIRTRFCACFTIKRNYSPIHKK"
ORIGIN      
        1 gtttgcctgg tcagagctca tcacttctgg gattcccaga gttaggttct gactgttaga
       61 agtaattaaa agtttttatt tcttaaaatt agttctgagc ctacacaaag gtggctaaag
      121 acatgttctc cactttgagg aagctctgct gctttaagag agagccaaaa acccccttgg
      181 ggttttgtga tggcccaagc aatagggagg ggagcctggc ttgttgtgac tgtagtcatg
      241 aggataagta tgggcactct tatgatccgg ataataaatt tcatgaagca gtgtgcatgg
      301 gaaagatcaa agtggtgctg catctcctct ctaagaagaa atttagcata aatgacacgg
      361 ataaaggaaa acgaactgca ctgcacttcg catgttttta tggtcatctg catctggttc
      421 agttcttatt atataatgac tgcatgataa atgcccttga tgatcaaaag gccacaccac
      481 taatgaaggc tgtacaaagc tgggagacaa agattgcttc tgtcctcctt gataatggag
      541 caaatcccaa ttgtaaagat tccaatggag aaacagcact acatcaggca gtatatgttg
      601 acagtccaga tattgctgcc agtctccttg aatatggtgc agacattgaa gaaactacaa
      661 aggatgggtt tacacctctc ctgctggcac ttcgagaaag gaaactcctc acagcagaat
      721 atttaataaa acatggtgca aatatttatg cacgggatga ttatcaaaga acaacactca
      781 tgtatgcagt gcaatgggat tctgaagtca ttgttgagca gttactggag aaaggaattg
      841 atcactcctt aaaggactca tttggatgga gtgcacttca gtatgcagtg gcaggaaaac
      901 gcaaagtaaa ggatataatt ttggactatg aggactcact cctcttaagt caacacagta
      961 tcttcacagg aaatctacat gcagacttct actcatcagg atatggtttc agatccgagt
     1021 cactgatttc tatgtgttca agagaggagg atgaatatta ttctgaaatc cagcaagaca
     1081 ttcctgaaaa tattatggaa aacggtgtgg atgatttacc agaagcttcc aaaatatatg
     1141 atgctgtaga agaacaaaaa gaagaactag gattagaaac agtactggat ttaaaactgg
     1201 aaaataaaga catatgccat aagaatgaag aataccaaaa cttgaacact tccaggaaag
     1261 ctgtccattc atacaacaca ggaaatggta cagacaataa tgaaacaagt caagtgtggg
     1321 ctgacaaatg tccacaccca gagactaggg attattctca tccaatctac aagcctaagt
     1381 ctgaatcaca acaatctcaa ccagatatag atttgtcaga agaactggaa gaagaaatat
     1441 cagaatctaa actggaaagt gagagaagtt ttcataaggg tgcagaaatt caaggattta
     1501 gtgtgtctaa ctctaatgga ctgcatgaaa attccacaga agttccacat tcatctaata
     1561 tgtacaataa tgcagaaaaa aaagtaataa agcttctgga gaaaaaatct accatggaag
     1621 ataaaataca gacctcagaa gaagaggaac aaaatactgt tagaacaagc aaaaggcccc
     1681 ttattcatac tataagaaca cgtttttgtg catgcttcac cataaaacgg aattattccc
     1741 ccatccacaa gaaatagaag agaaaacata gaagtatgta agagttacat tttgtcttaa
     1801 aagtctttag aaataatgtt tttataaaac atatactttg tattctagct gaggaatgtt
     1861 attatctaaa tgtagaatga gggataaaag agttaactat caatgtaata cttatctcat
     1921 gaataaacag gctaattaaa gatggtaaga ccaaagtgtg aatgcattga tcctacttag
     1981 aagtggagca aaataatcct gggagattgt gggaggtagg gactcgagag gaagagagga
     2041 gggggttaag ggcaaaggat caggtatggg aagaggcagg agagaagtat atagggacaa
     2101 taaattgaac agaaatgtgt agcattgggc atatagggaa ctatggatag ctacttgaaa
     2161 gttccacatg ccagtgaagg acccaacagg gatgacatta gtcaaaatac ccaacaaagg
     2221 ggagaaagaa cctgtagaga ccctcactag tagatagtca cagcccccag tggagggata
     2281 gggttatcca tacatcttaa aaattttaac ccagaatctt ttctatctaa atgtaatgca
     2341 cagagaaaaa atggaggaga gactgaagga aaggctgtct agagaccacc cgacctgggg
     2401 atccatccca cttgcagaca caaaactcca acattattgc tgatgccaag aaatgcttgc
     2461 tgaaaagagc ctggtatagc tgtccccaga gaggctctgc tagcacctga ctgatacaga
     2521 tgcaaatact cacagcccac tatcagaatt agctcagcaa ctacagtgaa agagttaggg
     2581 gaagggcagg agctgaagag aattgcaacc tcataggaag aagaacaata ataactaacc
     2641 tgaccactca gagctcccag agactaaacc actaaccaaa gagtacacga ggaaaaattc
     2701 catggttcca gctccatatg tagcagagaa ttgccttatc tggctggcat caatgggaag
     2761 ggaggtcctt ggtcctgtgg agccttgatt ctccagtaga aggggattgt gcaatggtga
     2821 ggcagcaatg ggggagtgag taggtattgc actcttagag ttaaagagga aggggatagg
     2881 atgggggttt tgtggagggt aaactggcaa ggaggataac atttaaaatt taaataaaga
     2941 aaataaccaa ttaaaattta aaaaggtgta ctatatatag ataatgtgcc atatagatag
     3001 atgacttaca gatatgcaga tgatatacat gccatatgta tgagtagata tttaaataca
     3061 tatgaagatt atattattta taaaaggtat atagataaac agatatgtag atgtagatgt
     3121 cgttttatgt gtttttatgt tacattttaa cagttcagaa atgttaggaa ataaggcata
     3181 agaaagaatg ttttatatta aagaacatta atattttcaa acacaggaaa taaatgcagg
     3241 gaaatgttgc agtgtatgtg gtggaaaatg acagattttt ttcattaatt agttaattat
     3301 ctattttcca aacataacat cccctccctc ctctccttcc agtccctccc tcttacctcc
     3361 cctcaacccc attccacttt cctttctcct cagagaaggg gattcttccc cttctctaac
     3421 atatcacttt agcatatcaa attccagtag aaccaattgc atcttcttca gttgaagcta
     3481 gaaaatgcag ctcagttggg ggaaggggat ccaaaatcag gcaacagagt caaacacagc
     3541 atttgctttt gctgtcagag tcccaaatca agatcaagct gcatatctgt tacatgtaca
     3601 tgtggtccta ggtccattgc atacacactg tctggctggt ggttcagtcc aatagacctc
     3661 catttagtta ggattttagg ttttctggtg gtatccttta tatctctggt tccattaatc
     3721 cttcctctcc ttcttcaaaa ctattcccct gagcctccta atgtttggct gcatctgttt
     3781 gcatcagctg gtgtgttaaa cctctcagat gacagttata ctaggctttt ttctgcaagt
     3841 acattaataa tgtcagaggt gaactctcat ggcatgtgtc tgaagttggg acaatcattg
     3901 gttggccatt cccttagctt ctgctcccac tttatacctg tacatcttgt tgtcatgaaa
     3961 atcttgtgga ttcaagaatt tgttgcttca tttttgtcat caactctcca ttggccatct
     4021 tgtctggtag aaggaggtag ccatttttgg tttaatatcc cccatggcta gaagtcttag
     4081 ctagtgttat ctcaggtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
     4141 tgacatatta acagttcggg aatattagaa aataaagcat aagatagaat gatattggtt
     4201 aaagaatata aacaatttca aacacaggga ataaatggca gaaatgtggc tgtgtgaatg
     4261 gtgacaagtg agagaatcaa ttctttagaa aaggaatagc tgtaactgta gggagaatat
     4321 caatgaattt ctagtagaaa agattcattc atgaataaaa aatgttccta aactccctcc
     4381 atgttttcct cattgttgtc aagtactaga gttatgatcc agtttagaat ttaaggctca
     4441 gttgaatttt atggttaggt ttaaaattat ataggtagag tagactaagg ttagaggtac
     4501 atgctgatat taaggttgac agctgtcttg gtgcatattg gcctgtcatg aacacaggat
     4561 atatatttga atattcatga tgaatgaaag atggatttta taaccatctt tacaggtata
     4621 agtgttctat aacttgttat gaatgctcta actctttata tcatatttca tatagtttta
     4681 taaggcagaa gatagagtta tgccccttaa atgtaatatt ttcatcctgg aactttgaca
     4741 gccctgtcat gattatctga aaattattct atccatctac aatattacaa ctggggagac
     4801 cataaatctc ttttccacaa atcggttcaa gggaagcaca tttttattat agtagtctat
     4861 tataatatat tatattattt tcagtgtttc tttccttgga tttattttat gttttgttat
     4921 attaatatat tctattgaat gtttatttta tattattgct tctccccttg atgtaaatat
     4981 tacttatgtt tatgtgttgt ataacatgca tctttttata agacattatt tttgagtgtg
     5041 taaagttatt caataaatat atggagtaac caatttaaag ttgttgacat ccatttacat
     5101 tccctttaac tctagtttct aatataggaa tataatactc agcaatggtc attgattatt
     5161 caagtatact ttttgaaaat tagcactgct taaaccactg cacattaaca tgcttctgtg
     5221 tcatcattta caatttggca tacatataca tataaaaatt gtgtgtttca aaaacactgg
     5281 atataaagta aaaattacat gtgatacttt aatattcgga tttaagactg tttatgcctc
     5341 aaaatgaagc cttgatggta acttaatttg aacaaaaatt tatagtagaa ttctttcttt
     5401 cattgttaac aaatttagga ggagataaga aaatttacta agaaattttt tctatgaaac
     5461 tgtgtaagtt atttaagtca tgtcacaaac agcatttgac aaaggatggt tttgatgtat
     5521 cgattcagag agctttagta catcaggaag aagaaggcat gatgcagcaa atcagtggaa
     5581 ggtggctaga ttgggaggtt gcagagatcc tcattatgat agacctataa aatgagaagt
     5641 tctgaaacaa aggatttgga atattcttca acgagatgat agtagtaatc tactgtacag
     5701 ggcatgcttc tcctttacaa atcctacagc ttttaaaaac cagcatcacc aattgggcac
     5761 aagcaattaa ttactacata tttcagtggg agatatttca cagataaacc ataacatttc
     5821 tcatggttat ctttctcata acggaaactt catttaggtc aacttgcagt gctcccatac
     5881 aattaaccat tcccccagtg ggcaaaagtc caaagttcaa agtgttttct gagtctcaag
     5941 tctctgatat tttgcaaaat caatataaat acttgttctt tatactatac aacatcacag
     6001 agtaaagact aacatctaaa aaggaaagtt taggtaatag caaggaaagc tttactgaag
     6061 aaaaccattt ctcaatggga acataccaaa tcattagcac caggtccagc aactgggaga
     6121 tatgattgta tgaaatgaac caaagggcct cggaagaccc tcttcagcct tgccttgtac
     6181 agtccacctg gcccttttcc tatacttgct ctacttattg actgaagtat cctatcatgt
     6241 ccatggcaac ttgtaactca tacatgtata tcctactctg gattttttta gagacctact
     6301 acatattacc caaataattc agattttctc ataatcttgg tagaattcat gtttctgtac
     6361 ttttgctgtc ccagttagca ttagctgtac caggttatga tcccaccaaa aatgggggag
     6421 tgttcctatt tctccatatc cttgccacca tctgttgtca cctaagtttt attttaattt
     6481 attggatatt ttatggattt acatttcata tgttatcccc tttcctccct ctcctattcc
     6541 ccccacttaa ttttatgaag gttctcccac tcctacaccc cacacccatt agccttccat
     6601 tcccttacat ttgggaaaca agccttcaca ggcccaaggg cttctcatat tgatgtcaga
     6661 aaattccacc ctctgctaca tatgtggatg gagccttggg cacctccatg tatactaatt
     6721 tgttcatggt ttagtaacta ggagctatgg tgggtagttt ggttggttgg tattgttgtt
     6781 catcctgtgg ggttgtaaac ctcttcagct ccttcagtca tttctccaaa tgctccattg
     6841 cggttctcat gctcagttca atggttagct gtaagcatcc tcatttttat cagtgaggat
     6901 gtagcctgac tgatcccatc cataagcccc ctagcccatc acccctgctc tttcttctat
     6961 gaaggtgttc ccccactcat ccacccacct cttcctgctt cctcgagctg atattctctt
     7021 aca
//
