LOCUS       XM_039080210            3178 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102548035
            (LOC102548035), transcript variant X1, mRNA.
ACCESSION   XM_039080210
VERSION     XM_039080210.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080210.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3178
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3178
                     /gene="LOC102548035"
                     /note="uncharacterized LOC102548035; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:102548035"
                     /db_xref="RGD:7543030"
     CDS             1905..2786
                     /gene="LOC102548035"
                     /codon_start=1
                     /product="uncharacterized protein LOC102548035"
                     /protein_id="XP_038936138.1"
                     /db_xref="GeneID:102548035"
                     /db_xref="RGD:7543030"
                     /translation="MLLKEKGVKSWHPSHKIHIHIRFSFPPYLCPASKKGRKEKERKK
                     ERKKERKKGRKEERKKEDKERKEINLKITSRCCSHGDHSQQRHSLTQETDSDLSPYLT
                     FVHEKNLNGMCQQMWFEAARRHTKQIQLLPGLRRALAFCLRTLVLSPLPTIGGKILLE
                     DNASVPVKLRLYADENLSCSVGTWSNNGVVVGQFRVLVRKLQETKTKVLPPVTSKTWN
                     CSWIMLSWPSKVQQIEPHLQRFTTCDHHIERESLRLFATHDLEKQEDSTKNTLRCWST
                     SLGNIRKFGYQQGDTSV"
ORIGIN      
        1 aaaagggcta tttggaaatc aaacctggat ccttgagttt ttgccagagc cctatctcca
       61 acccccacag ggaagttttg tacttttctg ctccttggct gcatcttatg agtaaatcaa
      121 gaacaataat ctgaattatc ttacagaaag ccgtctgttg taaagtcatg aagcaactga
      181 ggcccttggg acttggtcac ctttcacttt gtatcagtga cccgcacaaa cctactggac
      241 taaatgacta acatgtcttt tataactgcg gagaatccca taagttatgt gcttacccag
      301 ttcaccttta tatggatcca ctacatttaa atagtccagt cgaaacaaat gaaagagtaa
      361 ggtttttcag agttgtgaaa aattaaacgt ggtacatgga atgatagcag agactggaga
      421 aaataggata gttaattatc tgtcactatg acaacattcc caagtgaatc aacttaaagg
      481 acttattttg cttaatgctt tctgtccata tttgcttggc acaataactt ttgtattttt
      541 actgaagtat tcaattatgg cagtagtaca ttgtagaaga aagctgcaca tcttacaatg
      601 gccaagaaaa aaggagtgag gaagatgacc tggggagaat agatagggtc tcaaaagctc
      661 caacctacaa gtgactcttc tttactgagg ccctgtctct taaagttgct actccacaac
      721 attaatacta agaggtggag ccacagcctt gtacgcatga gcagtcatgg gtggggcatt
      781 atagatgaaa caacaggttt ctgtgactaa cacaggggca gcataaacac tttcagccat
      841 tgcaaagtag ggaatgggta aggaagatgc agatgagttc agatcctccc tctggagcta
      901 taataactga atctactgaa ctacaaggac aagagacggc ttaataggag aaaaaatata
      961 tgctttagtt aactagtaca tattcatggg agccttgtaa cagtagaaat tcaacaatag
     1021 gcagatggtt aaggcttaaa taaaccgtgt aaaggtggag agagaacctg gggatagtaa
     1081 gcaggcactt tacagtgatt agaattaatt tgttaggaga aatgagcagc ttgaaatgta
     1141 ggcctgtgac aaagtgcctg agaactagag gtgttctatt ttcaattgtt gtgttctatt
     1201 ttcagtttct tcctctgtga tgggagttga gtctattttg aatctaccgt gagtcagagg
     1261 atggagagaa tcatgttcct gtctgacagg gtcacaactg aaagagtttg ccttgagcct
     1321 cagatgagac tttggattta ggcatttgag tgaagtcgaa atgagttcag atgttgggca
     1381 catcgatgag gaatgtatat aaaatgtgtt tggagaagaa catgaacact ggtagtcaag
     1441 atggaacaat gaagtttata ctcagcagtg tttctcaagc ttccaatgct ggacacattt
     1501 aatacaattt tcattgttgg gctgacccct aaccataatt gctacttcat aactgtaaat
     1561 ttgccactgt tatgaatcat aatataaatc tctgatatgt aggatatcag atatgggatg
     1621 ccccaccaag gagctacaac ccacaggttg agaaccacta ttactcagta acataaatcc
     1681 ttgcaaaaga ttcatctacc ggaagtgtgg gtctcagtct aaggatgaaa ggtggaagaa
     1741 ccattaagag gtctgaccta ataaaaggga gataccacct cagaagtaac ggattcatcc
     1801 ggagcacagc agccaggcaa cgctctacag agattccaaa ggcaggagga tggtctccat
     1861 gggaaccaag ggggactttt cagaagaaat gagggttgac tgttatgtta cttaaggaaa
     1921 agggggttaa gtcttggcat cccagccaca aaattcatat acatataaga ttctcttttc
     1981 ctccatacct atgccctgcc tcaaagaaag gaagaaagga aaaagaaaga aagaaagaaa
     2041 gaaagaaaga aaggaagaaa ggaaggaagg aagaaagaaa gaaggaagac aaagaaagaa
     2101 aggaaataaa cctgaaaatt acatcaagat gctgttccca tggagatcat tcccagcaac
     2161 ggcacagtct cacccaagaa acggactctg acttgagtcc ttatcttact tttgttcatg
     2221 agaagaattt gaatggcatg tgccaacaga tgtggtttga agcagccaga agacacacca
     2281 aacaaattca acttcttcca ggtctacgac gagcactggc cttttgcctc aggactcttg
     2341 tgctttcccc tctgcctact attgggggaa aaatcctgct ggaagataat gcatctgtac
     2401 ccgtgaaact gagactatat gctgatgaga acttgagctg ctctgtcgga acatggtcca
     2461 acaatggcgt tgtggtagga caattccgag tgcttgtgag aaaactccaa gaaaccaaga
     2521 caaaagtctt gccacctgtt acttccaaaa catggaattg ttcttggatt atgctttcat
     2581 ggccctctaa ggtacagcag atagaacccc atctacagag atttaccacc tgtgatcatc
     2641 acatagaaag agaatcctta agactctttg ctactcatga tcttgagaaa caggaagatt
     2701 ctactaaaaa taccctgagg tgctggagca caagcctggg aaacataaga aagtttgggt
     2761 atcagcaagg agacaccagt gtgtagctga cttttcacat ccagaaatga tctaaatatg
     2821 cttcgtggga ttcaaaatca gcatcagctc ctcttagcaa aaatcgcttt catctctcca
     2881 agagctgctt ctgtggaatg tgtggtcatt ctttgctaga aggcatttgg ggaagccaca
     2941 tcagcctaaa ttctcatgag aattcctctt gcctgtcaga tactttatct tcaaagaatg
     3001 gcacttgact gttacgggat ccctccatcc tccatgacaa aatgagaaag tatacattgg
     3061 tgtttcaact gcttcagtta ttgaggtgac attttgtacc atgtgatggg ataggaatgt
     3121 catcatgttt catctgtatt tgtgaaataa aatgtgcaac cctcattttc actgaaaa
//
