LOCUS       XM_039108940            3459 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 729-like
            (LOC102547920), transcript variant X1, mRNA.
ACCESSION   XM_039108940
VERSION     XM_039108940.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039108940.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3459
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3459
                     /gene="LOC102547920"
                     /note="zinc finger protein 729-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 8 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 6 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:102547920"
                     /db_xref="RGD:7716029"
     CDS             197..2464
                     /gene="LOC102547920"
                     /codon_start=1
                     /product="zinc finger protein 431-like isoform X1"
                     /protein_id="XP_038964868.1"
                     /db_xref="GeneID:102547920"
                     /db_xref="RGD:7716029"
                     /translation="MSSLPAEDAVTYNDVHVNFTWEEWALLDPSQKNLYKDVMLETYR
                     NLTAVGCSWKEHNIEERCQSSRRHGRHEKSPTEEKSSEYTQCGKAFACHSYPEMHERI
                     HSGEKLYEDIQYGEAVVHHSGLQIQKRTHTRENPYKCNQCDKAFANYGQLQRHERTHT
                     RKKPYQCNECGKAFAYLSIIQMHKRTHTGEKPYKCNQCGKAFAYLSSFQMHKRTHTRE
                     KPYKCNQCGKAFAYLSSFQMHKRIHTGEKPCKCNQCGKAFAHYSTLQKHKITHTGEKP
                     YECNQCGKAFARQSNLQGHKRTHTGEKPYECNQCGKAFARQSHLQVHKRTHTGEKPYK
                     CNQCGKAYKCRSSVNNHKIMTYSGQKPYECNQCGKAFVYHCILRKHKRTHTREKSYKL
                     NQCGKTYKFNGLQNHKTTDTGEKLYECNECGKAFPHLHRLKRHERIHTGEKPYKCNEC
                     GKAFAYRSSLPKHKRTHTGEKPYKCNYCGKAYSQHSNLKTHKRIHTGEKPYECNQCGK
                     AFALKSHLQVHKRTHTGEKPYKCNQCGKAFARQSYLQGHRRTHTGEKPYKCNQCGKVF
                     AYPGYLQVHKRTHTGEKPYKCNQCGKAFPCVRECKRHERIHTGEKPYKCNECGKAFGY
                     HTSLQIHKATHSGKKPYECKQCNKAFAHHSQLQRHERIHTGEKPYKCNQCDKAFAQHN
                     SLQIHKIIHTGEKPYECNQCGKAFAYHGYLQIHKRLHTGEKPYECNQCGKAFASQSDL
                     KKHERIHTGKKPYKC"
ORIGIN      
        1 aggtgattcg ttctccgcca atccctggag gacaagtagt ggggtgatag tggggtgacc
       61 cgtgccccac caatccctga gagattatta gcatactgtt gtgtatataa ggcgagcgaa
      121 tttgcagctc atggtccccg tgtcaacaat gaaggtgtcc tgcagtaaag gctgttgaga
      181 agaatccaac cgtgttatgt cttccttgcc ggccgaggat gcagtgacct ataatgatgt
      241 gcatgtgaac ttcacttggg aagaatgggc tctgctggat ccttcacaga agaatctcta
      301 caaagatgtg atgctggaga cctacaggaa cctcactgct gtaggttgca gttggaaaga
      361 gcataatatt gaagaacgtt gtcaaagttc tagaagacat ggaagacatg aaaaaagtcc
      421 tactgaagag aaatcctctg agtatactca gtgtggtaaa gcctttgcgt gtcacagtta
      481 tcctgaaatg catgaaagaa tccattctgg agagaaactc tatgaagata ttcaatatgg
      541 tgaagccgtt gtacatcaca gtggtctcca aatacaaaaa agaacacata ctagagagaa
      601 cccctacaaa tgcaatcaat gtgataaagc ttttgcaaat tatggtcaac ttcaaaggca
      661 tgaaagaaca catactagaa agaaacctta ccaatgtaat gaatgtggta aagcctttgc
      721 atatcttagt attatccaaa tgcataaaag aacacatact ggagagaaac cttataaatg
      781 taatcaatgt ggtaaagcct ttgcatatct tagtagtttc caaatgcata aaagaacaca
      841 tactagagag aaaccttaca aatgtaatca gtgtggtaaa gcctttgcat atcttagtag
      901 tttccaaatg cataaaagga ttcatactgg agagaaacct tgcaaatgta atcaatgtgg
      961 taaagccttt gcgcattaca gtactctcca aaaacataaa ataacacaca ctggagagaa
     1021 accctatgaa tgtaatcaat gtggtaaagc ctttgcacga caaagtaatc tccaagggca
     1081 taaaagaaca catactggag agaaacccta tgaatgtaat caatgtggta aagcctttgc
     1141 acgacaaagt catctccaag tgcataaaag aacacatacg ggagagaaac cttacaaatg
     1201 taatcaatgt ggtaaagcct ataaatgtcg tagtagtgtc aacaatcata aaataatgac
     1261 atatagtgga cagaaaccct atgaatgtaa ccaatgtggt aaagcctttg tgtatcactg
     1321 tattctccga aaacataaaa gaacacatac tagagagaaa tcttacaaat tgaatcaatg
     1381 tggtaaaacc tataaattta atggtctcca aaatcataaa acaacagata ctggagagaa
     1441 actctatgaa tgtaatgaat gtggtaaagc ctttccacat cttcatagac ttaaaagaca
     1501 tgaaagaatt catactggag agaagcctta caaatgtaat gaatgtggta aagcctttgc
     1561 atatcgcagt agtctcccaa aacataaaag aacacatact ggagagaaac cctataaatg
     1621 taattattgt ggtaaagcct attcccaaca cagtaatctt aaaacacata aaagaataca
     1681 tactggagag aaaccctatg aatgtaatca gtgtggtaaa gcctttgcac taaaaagtca
     1741 tctccaagtg cataaaagaa cacatacggg agagaagcct tacaaatgta atcaatgtgg
     1801 taaagccttt gcacgacaaa gttacctcca agggcataga agaacgcata ctggagagaa
     1861 accctacaaa tgtaatcagt gtggtaaagt ttttgcatat cctggttatc tacaagtaca
     1921 taaaagaaca cacactggag agaagcctta caaatgtaat caatgtggta aagcctttcc
     1981 atgcgttcgt gaatgtaaaa gacatgaaag aattcatact ggagagaagc cttacaaatg
     2041 taatgaatgt ggtaaagcct ttgggtatca cactagtctc caaatacata aagcaacaca
     2101 ttctggaaag aaaccttatg aatgtaagca gtgtaataaa gcctttgcac atcatagtca
     2161 acttcaaaga catgaaagaa ttcacactgg agagaagcct tacaagtgta atcagtgtga
     2221 taaagccttt gcacaacaca attctcttca aatccataaa ataatacaca ctggagagaa
     2281 accctatgaa tgcaatcaat gtggtaaagc ctttgcatat catggttatc ttcaaatcca
     2341 taaaagatta cacactggag agaaacccta tgaatgcaat caatgtggta aagcctttgc
     2401 aagtcagagt gatcttaaaa aacatgaaag aattcacact ggaaagaaac cttacaaatg
     2461 ttaatgaatg tggtaaagcc tttgtatgta acgagtgtga atacataaag caacacatgc
     2521 tggagtgaat gtaagcaatg tagcaaattg tctgcctctt gtggtcaact tcaaactcat
     2581 gaaagaattc ataccaaaga gaaaccttac aaatgtagtg aatgtggtaa agcctatcca
     2641 caatcaggtc atctccaagt acataaaaga acacatatta gagagtaatc ctgtgaatgt
     2701 aaccaatgtg gtaaagccgt tacaggtcac agtgatcttc taaggtatgg tgctttgaat
     2761 atgcttggtc catggcaagt gggactatta ggaggggtgg gctttctgga gtaggtgtgg
     2821 cctttgagga agtacgtcac tgtggggatg gctttgagat cctacgctta agctccaccc
     2881 agggcagaag agttttctcc tggatgcctt ctgatcaaga tgcagaactg tcatgtccag
     2941 caccatatct gcctggacat tgccattttt tccaccttga taatagactg aacttctgaa
     3001 tcagtatacc accctaatta aatgtccttt ataagagttg ccttggtcat ggtgtctttt
     3061 cacagcatta aaacctaaat taagacaaac agcataaaag ataccacact agaaagaaac
     3121 taggaatgta ctgaatatgg tgaagccttt gcacatttct atatctcact ataacaaaag
     3181 tattcatact tccattcact gaaaccctgt gaatggaagc aatgtacagc ctttgccctt
     3241 cccagttatc tgtgaataca gaaaataaca catactagag aaaagcctta tgaatgggct
     3301 ccgtgtggta aagtctttgt gttttgaaat acttaacaat tcaaaaacat ggtcaaagta
     3361 gttcattgga aacaagctga gttagctgtg attggggtgg ttgggtgcgc agttattgct
     3421 agaaagttag gggttagggt taaagggtta gtgggtata
//
