LOCUS       XM_017593107            2072 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102547820
            (LOC102547820), transcript variant X1, mRNA.
ACCESSION   XM_017593107
VERSION     XM_017593107.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_017593107.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2072
                     /gene="LOC102547820"
                     /note="uncharacterized LOC102547820; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 45
                     Proteins, and 74% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:102547820"
                     /db_xref="RGD:7512196"
     CDS             364..1470
                     /gene="LOC102547820"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 44-like"
                     /protein_id="XP_017448596.1"
                     /db_xref="GeneID:102547820"
                     /db_xref="RGD:7512196"
                     /translation="MMNTSTQFQKHKDRNVLLRPDLNCALYTITQYQCAGHMTRHFMR
                     KPSADMSIETILCQKQFQVYLLLFASYTHTMNKDNILHTDTNIKITLFSEVSVGISAN
                     SILFFAHLSMLLGENRPKPIDLYIAFLSLTQLMLLITMGLIVLDMFTYQGRWDSTTCQ
                     SFIYLHRFLRGLTLCAICSLNILWTIILSPRSSRLTKFKHKYPHHISGAFLFLCVFYM
                     SFSSHYLVSIIATPNLTSDNFMYVTQSCSLLPVSYSRRSMFSTPMAIREAFLISIMAL
                     SSGYMVALLWRHKNQAQHLQSTRVSTKASPEQRAIRTILLLMIFFVVLYILENVVFYS
                     RMKFKDCSIFFCFHIIVSHSYATVSPFVFICTEK"
ORIGIN      
        1 ttcttgggcc agggatgtgg gcagtggtgg gctgttttgg tggtctcctc tgctctgcag
       61 cctcaggagt gcccacctga ccaggcggtg aggtctctct ccctcatgtc ctctcttgac
      121 acattgctga catctgatta ctgacggttt ttcttgtatg agtcactggt ggcttctccc
      181 gcactgtttt ccaagtagtt gaccaagtcg aatttttagg taaagaatac tgcccattgt
      241 aactccattc caaacagaac cttatttcat acagcagagc caatccaacc ttccaaacct
      301 tcattccatt ctacagggag gcacagcaag gatgagagct atggttaggg tgagcttgtg
      361 acaatgatga atacaagcac acagtttcag aaacacaagg acagaaacgt gttgctcaga
      421 cctgacttaa actgtgctct ttacacaatc actcaatacc agtgtgcagg ccacatgaca
      481 aggcacttca tgagaaaacc atcagctgac atgtctatag agaccattct gtgccagaaa
      541 cagttccagg tttatttgtt gctatttgct tcctacacac atacaatgaa taaagacaac
      601 atacttcaca ctgacacaaa cataaaaatc accttgttct ctgaagtgag tgttgggatc
      661 tcagctaaca gtatcctgtt ttttgcccac ctttccatgc tccttggtga gaacaggccc
      721 aaacccattg acctttacat tgctttcttg tccctaaccc aactaatgct gcttataact
      781 atgggcctca tagttctgga catgtttaca tatcagggga gatgggattc taccacatgc
      841 cagtccttta tctatttgca cagatttttg aggggactca ctctttgtgc tatttgttct
      901 ctgaatatcc tttggaccat cattctcagt cctagaagct cccgtttaac aaagtttaaa
      961 cataaatatc cccatcacat ctcaggtgcc tttcttttcc tctgtgtttt ctatatgtcc
     1021 tttagcagtc actacttagt atcaattatt gctaccccta acttgacttc agataatttt
     1081 atgtatgtta ctcagtcctg ctcactccta cctgtgagtt attccagaag aagcatgttt
     1141 tccacaccga tggccatcag ggaagccttt cttattagta tcatggccct gtccagtggg
     1201 tacatggtgg ctctcctatg gaggcacaag aatcaggccc agcatcttca gagcaccaga
     1261 gtttctacaa aagcatcgcc agagcaaaga gccatcagga ccatcctgct gctcatgatc
     1321 ttttttgtgg ttctctacat tttggaaaat gttgtcttct actcaaggat gaagttcaag
     1381 gattgctcta tattcttctg tttccatatt attgtgtccc atagctatgc cacagtcagt
     1441 ccttttgtgt tcatttgcac tgaaaagtga atcattaagt ttttgaggac aatgtttgac
     1501 agaatagcac atatttgatc attcagtgat gggcatggac cctgaatata ttccagtaag
     1561 ttgtaatcag agctatggat cgtgacatat ttgcaacatt cttgggctta aattcatata
     1621 agaaaatttt cttttttctg ttaactctgt ttcctttgtg tgtggatgac aagtatataa
     1681 aggaagatta aacagcatgt cttctcagat atcattaaag gtttagattt ctcagtgtgt
     1741 ttttgaagga gatctgtgag agggcttagt ccaccaggaa catcttgaac atgtaccctg
     1801 ccagagagac accaacagag tgaattacaa tgacagatct tagaggactc aaattgagag
     1861 agatgatgaa cagagtactt tacctggggt caaaatattc aaatttaaag aataaattag
     1921 tcatacctaa ttacttagcc ttagtctcag taaacatcaa gaaaactgtg ggcttgtagc
     1981 atgcctgaat acttgagatt aaaccaatac ctcctcagag caaactttgt gcaggtgaac
     2041 acaaacacag ccacacactt tacacagctg aa
//
