LOCUS       XM_039101477             861 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus histocompatibility 60b like 2
            (H60bl2), mRNA.
ACCESSION   XM_039101477
VERSION     XM_039101477.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086019) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 25% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..861
                     /gene="H60bl2"
                     /note="histocompatibility 60b like 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:102547284"
                     /db_xref="RGD:7606069"
     CDS             121..861
                     /gene="H60bl2"
                     /codon_start=1
                     /product="histocompatibility antigen 60b-like"
                     /protein_id="XP_038957405.1"
                     /db_xref="GeneID:102547284"
                     /db_xref="RGD:7606069"
                     /translation="MAKGATSKCNHSLTLSLLVLLNSLGTMQVDGNHTLRVTVQSQYN
                     QGEFMDGCWAFMIDRQYPFYFYPKNMTWRENQPNAIKTMSQWENNRELFQSLKFLSTG
                     DFSLCLKKLLTDSRELTRSTIKAPDTTQPTSTTQSPSTGNSTPAMSSNQSSSTGNSTQ
                     PTSTTDYLIIFEFTAIFLALIVVSMEKKRCFLLLPFLFSMNFSPHHQLYGMNLEHISV
                     ASPAKEHISHDISENLAADFEPDCHSVI"
ORIGIN      
        1 atgggcgtgc cacctccctg ggtagggact ggcctggtat aaatttctct gactctggtg
       61 gcaggctgca tctgatcaag ctccagtcac accataggca gcagggtctc aggaagggcc
      121 atggcaaagg gagcaaccag caagtgcaat cattctctca ctctgagcct tttggttctg
      181 ctgaactctc tgggcaccat gcaggtagat ggtaatcaca ccttgcgggt cactgtacaa
      241 tctcaatata atcaaggaga attcatggat ggatgctggg ccttcatgat tgatagacag
      301 tatcccttct acttttatcc aaaaaatatg acctggagag aaaatcagcc taatgctatc
      361 aagaccatga gtcaatggga gaataacagg gaactattcc aaagtctcaa gttcctctcc
      421 acgggagatt tcagtctgtg cctcaagaaa ttgttgacag actccagaga attgacaaga
      481 tcgacaataa aggcaccaga taccacccaa cctacatcta ccacccagag tccatctaca
      541 gggaatagca ccccagccat gtcttccaac cagagttcat ctacagggaa tagcacccaa
      601 cctacatcta cgactgatta tctaattata tttgagttta cagcaatctt ccttgcattg
      661 atcgtggttt ctatggaaaa aaaaaggtgc ttcctgctgc tccccttcct ctttagtatg
      721 aacttcagtc cccatcacca gctgtatggg atgaatcttg aacatatttc tgtggcttct
      781 ccagcaaagg aacatatttc tcatgacatc tcagaaaacc ttgctgctga ctttgaacca
      841 gattgccatt ctgtgatcta a
//
