LOCUS       XM_039096435            2718 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus spermatogenesis-associated protein
            31C2-like (LOC102547119), mRNA.
ACCESSION   XM_039096435
VERSION     XM_039096435.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2718
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2718
                     /gene="LOC102547119"
                     /note="spermatogenesis-associated protein 31C2-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 ESTs, 1 Protein, and 85% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:102547119"
                     /db_xref="RGD:7585937"
     CDS             1..2718
                     /gene="LOC102547119"
                     /codon_start=1
                     /product="spermatogenesis-associated protein 31A3-like"
                     /protein_id="XP_038952363.1"
                     /db_xref="GeneID:102547119"
                     /db_xref="RGD:7585937"
                     /translation="MSPSTSSWYKAAARTWCHSKWSQDETLQEDLHFSFQEASLWTDP
                     GYRQLEAGEPPFIKPDVQKILELQISKRVELKLWKEQGRESFDHALSCVGDMLQSWSS
                     EQAITCKSEQLSGLHQLFSPRVLWNKSQKDCRQLYWGLPFLHSESLMATVSMVGSPLD
                     SPAIFFNELSPYNLRQAERNAAPLLFSPKPLLQHLVPSNPLTTNVPCPRSPPGSEVKT
                     LAPDPTSLPSLQPDPPPTRDSRASCPIDSKSQLIFPVAVQHLDQHLLKKNQESRSDLP
                     SVVKMSQEVSHQLISTSLASQGQDSVLHFLKDFTDPQLKEHLEQHLKTRFWKHEDQKI
                     QLSTYLMKSEDKLPGMGHAEDNRGTSCSSALAGKSSPHAQRVSAKGPEILQTGKDPCC
                     DLTNGPGRPLRDTDGITEGSLGTVLDSIAVTEVENSVRQPRSDSAGPQPGGPGEQQLQ
                     DTLRNHFSEHSHDNDSMVPVGTCPGIPGDHMVVCRENSETHLDNSEIEKPETNIKTEK
                     QKSLNDGSTFKDTSPGLPLLDPDVQQVLETHLSRHLVRHRWILPLRGLRALQLFKVNK
                     AVALSLPQPPSPSQTSLKSRDDSVTKIAAVLGDPFQKGSEGDLKRKTVFQSQTPPSAL
                     NLEFPSGTRPSDKLCPSESPSNVQKSRVASLYRTRSLVVRDRHSDTVLGPRNDNPVPG
                     PNLLKSDHASQESEGADLDLSHGLSVQGTIVDAWPTTSRDKRELEEEGSCDWALNAEA
                     REMSPTQSKEHLKGIESLKVNEKQSPSRAISKEPEDSVTAVFLQDCSPGMIFQDCGPE
                     VLLEADLLASQASQSGFRTRSTTSKTSSRDMYPYFSRGGNVPKNIKSEEPWTSHIYDL
                     TKYKEGFRGPSTDYGLSGTRPLALHRKLEEPFIFPVSGCQPRKQSQKIV"
ORIGIN      
        1 atgtctcctt caacctcttc ctggtacaag gcggctgcca ggacctggtg tcattctaag
       61 tggtcacagg atgagaccct gcaagaggat ctccatttca gcttccagga ggcctcattg
      121 tggacagacc ctggatacag gcagctagag gctggagaac ccccgttcat caagcctgat
      181 gtgcagaaga tactggagct gcagattagc aagagggtag aactgaagct ctggaaagag
      241 caaggaaggg agagctttga ccacgccttg agctgtgtgg gtgatatgct gcagtcctgg
      301 agcagcgagc aggccatcac ctgcaagtca gagcagctct caggtctcca tcagctcttt
      361 tcccccaggg tcttatggaa caagtctcag aaggactgca ggcagcttta ctggggcctc
      421 ccctttcttc acagtgagtc ccttatggct actgtcagca tggtgggctc accactcgac
      481 tcccctgcca tctttttcaa tgaactctct ccttacaact taagacaagc tgagaggaat
      541 gcagctccac tgctcttctc tccaaagccc ttgcttcaac acttggtccc ttccaatcct
      601 ctgactacaa acgtgccatg cccccgttct ccaccagggt ctgaagtcaa aaccctggcc
      661 cctgacccaa cctccctccc aagcctacaa cccgatccac ctccaactag ggattccagg
      721 gcttcctgcc ccatagattc aaaatcccaa cttattttcc cagttgctgt tcaacaccta
      781 gatcagcacc ttttgaagaa gaaccaagaa agtaggagcg atttacctag tgtagtgaaa
      841 atgtcacaag aagtctctca tcaactcatt tccaccagtt tagcttccca gggacaagac
      901 tctgttctcc acttcctgaa ggatttcact gacccccagc tcaaagagca cctagagcaa
      961 cacttaaaaa ccaggttctg gaaacatgag gaccaaaaga tccagctatc tacttatctc
     1021 atgaagtctg aggacaaact cccagggatg ggtcatgcag aagataatcg agggacttca
     1081 tgttcctcag cactggcagg aaaaagcagc ccgcatgcac agagggtctc agcaaaaggt
     1141 ccagagatac tccagacagg gaaggaccca tgctgcgatc tgacaaacgg tccgggaaga
     1201 cctctgagag atactgatgg gatcacagag ggatctctgg gcacagttct agactcgatc
     1261 gctgtgacag aggtggagaa ctctgtgaga cagccaagaa gcgactcagc aggtccccag
     1321 ccaggaggac caggagagca gcagctacaa gacacactga ggaaccactt cagtgagcac
     1381 agccatgaca atgacagtat ggtgcctgtg ggcacttgcc ctggaattcc gggggaccac
     1441 atggtggtct gtcgtgaaaa ctcagagacc catttggaca actcagaaat tgaaaaacca
     1501 gaaacaaata tcaaaacgga gaagcagaag tcgttgaatg atgggtccac cttcaaggat
     1561 acttctcctg ggcttccctt gctagatcct gacgtccagc aggtgctgga aactcatctt
     1621 tcaagacacc tggtgaggca cagatggatc ttgcccctca gaggcctcag ggccctacaa
     1681 ctcttcaagg tgaacaaggc tgtagctttg tcacttccac aacccccaag tccctctcag
     1741 acatctttga aatctaggga tgactctgtt acaaaaattg ctgctgtcct gggagaccct
     1801 tttcagaaag gttcagaagg agatctgaaa agaaaaacag ttttccagag tcaaacccct
     1861 ccctctgccc tcaaccttga atttccaagt ggaactcgtc ctagtgacaa attatgcccc
     1921 tctgagtccc cttcaaatgt ccagaagagc agagtggctt ccttgtacag gacacgcagc
     1981 cttgtagtca gagaccggca cagcgacaca gttctaggac ctcggaatga caacccagtg
     2041 ccaggtccaa acctactcaa gagtgaccat gcctcacagg agagtgaggg tgcagattta
     2101 gacctctccc atgggctgtc agttcagggg accattgtgg acgcctggcc aacaactagc
     2161 agagataaaa gggagctgga ggaggaaggg tcctgtgact gggcactcaa tgcagaagcc
     2221 agggaaatgt cacccactca gagtaaagaa catctgaaag gtatagaatc cctgaaagtc
     2281 aatgaaaaac agtcaccttc cagagccatt tccaaggagc cagaagattc tgttactgct
     2341 gtcttcctgc aggactgtag ccctggcatg atctttcaag actgtggccc agaggtcctg
     2401 ctggaggcag atctcctagc ctctcaggcc tcacagtcag gcttcaggac taggtccact
     2461 accagcaaaa catcctccag ggacatgtac ccttactttt caagaggagg gaatgtgccc
     2521 aagaatatta aatctgaaga accatggact agccatatct atgatctaac taaatacaaa
     2581 gagggcttta ggggccccag tacagactat ggactctcag ggacccgtcc gctggcgctc
     2641 caccgcaagc tggaggagcc ctttatcttt ccagtgtctg gatgccaacc cagaaagcag
     2701 tcccagaaga ttgtctaa
//
