LOCUS       XM_039108947            1932 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus protein phosphatase 2, regulatory
            subunit B', alpha like 1 (Ppp2r5al1), mRNA.
ACCESSION   XM_039108947
VERSION     XM_039108947.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086022) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1932
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..1932
                     /gene="Ppp2r5al1"
                     /note="protein phosphatase 2, regulatory subunit B', alpha
                     like 1; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 ESTs, 9 long SRA reads, 36
                     Proteins"
                     /db_xref="GeneID:102547086"
                     /db_xref="RGD:7696800"
     CDS             1..969
                     /gene="Ppp2r5al1"
                     /codon_start=1
                     /product="serine/threonine-protein phosphatase 2A 56 kDa
                     regulatory subunit alpha isoform-like"
                     /protein_id="XP_038964875.1"
                     /db_xref="GeneID:102547086"
                     /db_xref="RGD:7696800"
                     /translation="MHGSSSGDPLPLRASPLNYKYKNGVFKLLELFDSEDPGERDFLK
                     TVLYRIYGKFLGMRAFIRKQTNNIFLRFIYETEHFNGVAELLEILGSIINGFALPLKA
                     EHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCSQ
                     KEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNEYILS
                     LIEENIDKILPIMFASLYKISKEHWNQTIVALVYNVLKTLMEMNGKLFDDLTSSYKAE
                     RQREKKKELEREELWKKLEELKLKKALEKQNNAYNMHSILSNTSAQ"
     polyA_site      1932
                     /gene="Ppp2r5al1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgcacggct ccagttccgg ggatccattg cctcttcggg cttctccatt gaattacaaa
       61 tataaaaatg gggtgttcaa gctcctggag cttttcgaca gtgaagaccc aggagagcgt
      121 gacttcctga agaccgtcct gtaccggatt tatgggaagt tcctgggaat gagggcgttc
      181 atcagaaagc aaaccaacaa catcttcctc aggtttatct atgaaacgga gcatttcaat
      241 ggagtggctg agctccttga aatactggga agtatcatca atggctttgc gttgccactg
      301 aaagcagaac ataagcagtt tctaatgaag gttcttattc ctatgcatac tgcaaaagga
      361 ctggctctgt ttcatgctca gctggcctac tgtgttgtgc agttcctgga gaaagacacg
      421 acactgacgg agccggtgat cagaggactc ctgaaatttt ggccaaaaac atgcagtcag
      481 aaagaggtga tgtttttagg agaaattgaa gagatcttag acgtcattga gccaacacaa
      541 ttcaaaaaga ttgaagagcc gctttttaaa cagatatcca agtgtgtctc cagttctcac
      601 ttccaggttg cagagagagc actgtacttc tggaataacg aatacattct cagtttgatt
      661 gaggagaaca tcgataagat cctgcccatc atgtttgcca gtttgtataa aatttccaaa
      721 gaacactgga atcagactat tgtagctctg gtatacaacg tgctgaaaac cctaatggag
      781 atgaacggga agctttttga tgaccttact agttcctaca aggctgaaag acagagagag
      841 aagaagaaag aactggaacg cgaagaatta tggaaaaagt tagaagagtt gaagctgaag
      901 aaggctctag agaaacagaa caatgcttac aacatgcaca gtattctcag caataccagt
      961 gcccagtaaa aggtcagctc cccctgctgg gcggcagtgt tgtacactct tggaatatat
     1021 aaaaacttca aagccaaacc tcatcagtat aatgtaatta ggaggccagt ttttcctggc
     1081 aagcgtaagc gaaagagata aggactaaac atagccctgt gctgtgccac ggccacagta
     1141 tattgtaaac tttgtctaat catggagtgt cactgtcatc tgttgagtga ggtgactgtg
     1201 ggagtggcgt gagtcacacg acttagccca ggtgtgctgc acacacagat caagccggcc
     1261 tctgcacact tcctttatca tgtgctttca cagtgctgca caccttgggt acttctgagg
     1321 aaagaacctt ccttcatgag aaaagctgag gtgttgccct tcccttcccc tctcctagag
     1381 aggtggacgg ggagataaag gcccagcctc attaaagata ctgccatact ctgggttttg
     1441 caacatcttg cgtttccagg cttccgaagc acaaagtatt aaaagctggg gggaagtaaa
     1501 ccaaatgttg actgttccca aatcccctgc agcagcagca cccggagcgt gcgcagagca
     1561 gcacgggcgg gtggacccta gctcacctcc ttcattcctc caaggctgga ggcagggcct
     1621 tcccagtcct caacctgccc ctcccaggcc tgcctgcagg gtgaaggagg ccctgggtcc
     1681 cacagtgtga tgcggactgc tagctatcac tgcctggctt tgtgtaaggg aaatgcagtg
     1741 ggcaaactct gaattgactg cgtagaagcg ttgtatgttt ttacctggtc gggtattttt
     1801 cacacctgtt gttatcagta ccattccaac ctcttgcctt gcagttgtat ggaaaaccgt
     1861 tttataatga aagatcttca ctggggattg agcagcattt aataaagtct atgtttgtat
     1921 tttgaaaaaa aa
//
