LOCUS       XM_006233904            5131 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102547011
            (LOC102547011), transcript variant X1, mRNA.
ACCESSION   XM_006233904
VERSION     XM_006233904.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006233904.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006233904.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5131
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5131
                     /gene="LOC102547011"
                     /note="uncharacterized LOC102547011; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:102547011"
                     /db_xref="RGD:7579002"
     CDS             272..970
                     /gene="LOC102547011"
                     /codon_start=1
                     /product="uncharacterized protein LOC102547011 isoform X1"
                     /protein_id="XP_006233966.1"
                     /db_xref="GeneID:102547011"
                     /db_xref="RGD:7579002"
                     /translation="MASSGYDVSTSFVILIPREPSARRRKRASAQRKEEARARASSCW
                     SWVWGEEQRQADDDGQLEMNDFAVLKADPGQVFWPAQVTTDNTASAPPTTDDVMFLGV
                     VPCPDADLIRGVSPQSHDAGNCSNLMEETKTFSSTESLRQLSQQLNGLVSESTSYING
                     EGLTSSNMEEPEGLDHGIQETLSQKFHRGRRACNVAQWLHSYLLGTRLWVRFLEPKQK
                     KRSHGITRVCLSNT"
ORIGIN      
        1 aaaaaaaaaa aagaacacag agagaagccg tgctccctcc aggatgccta atgcggtgac
       61 atcccacaag ctgggctggg catgttggtt ttcggtggcc ttgagggtgc aggaatgggt
      121 gtttgcagcg tcctttcaaa tgacaggtgg gtcatgttca accacgtgga gagctggagt
      181 gcaggggagc tgtgagctca ccgcagcatt gtgagctcac aactgagctc acagacacac
      241 tttagacacg gtgactccag ctagggcaga gatggcttcc tctggttatg atgttagtac
      301 ttccttcgtg attctcattc cccgagagcc atctgccaga cgaaggaaac gggcctctgc
      361 ccagcggaag gaggaggctc gagcgagggc ctcatcctgc tggagctggg tatggggaga
      421 ggaacagaga caggcagatg acgacggtca gttagagatg aatgacttcg cagtcctcaa
      481 agctgatcct ggccaggtgt tctggcctgc tcaggtgacc acagacaaca ctgcttctgc
      541 acctccaacc actgatgacg ttatgttcct cggggtcgtt ccttgcccag atgctgatct
      601 cattaggggg gtgtcacctc agagccacga tgctggcaat tgctctaacc tcatggagga
      661 gaccaagact ttctcttcga ctgagagtct gcgacaactt tctcaacagc tcaatggcct
      721 tgtgtctgag tctacatcct acatcaacgg ggagggcctc acgtcttcca acatggagga
      781 acctgaaggc ctggaccatg gaatacagga gaccctgtct caaaaattcc ataggggtag
      841 gagggcttgc aatgtagctc agtggctaca ttcttatctg ttgggcacaa ggctctgggt
      901 tcgattccta gaaccaaaac agaaaaagag aagtcacggg atcacaagag tatgtttgag
      961 caatacttag ccaatctgag acacttgggg acatccagat aagaaacact gacatccgta
     1021 caagagaaag acagacgttc agtcgtgctg tggacagtcc caacctgaaa cagtatgaac
     1081 agaagacaga gacaggaatt ttgtttagtt gagaagcgag cagaaatagt gacaggcagg
     1141 ttggtccatt cagacccttg gtatgagaca agagcctcac tcactcacat cttaaccagg
     1201 atgtgctttt gcatcgatca ttggtaccaa gggcactggg gagaaaaaca ttccctagat
     1261 ccagttctgt gtgagaacag ctctctcgtg tgccatagca cacactagcc tctagggggc
     1321 agtgtccgct cagcgatgtg cccatcagtt ggttagagtc tcttctgtga gtccctcaag
     1381 tccctcccat ctgtgcagac cagccaggct cctggtcata agctggatct ttcagctctc
     1441 ttcccaggag tctcaagaga gcagtaggga gctacttggt tggaaaatcg agcccgacat
     1501 gcaaggcctg tatgctatac acagacaccg cctcacatct ggtgtaaacc ctacctgaaa
     1561 acacttgaga gccaggtacg atggttcaca cctgtaatcc caactccaga ggctgaagca
     1621 agagagcacc gcagttcagg gccagtccca cccttcctgc atagtcaggc cctgtccaaa
     1681 aataaaagta aacccagcaa gctgggtaga tcacttcagc ccatagatca agaccagcct
     1741 gggtaagcag tagagaacct atctcaaggt ttaaggactg gcctggagtt cagctcaaag
     1801 cctgcattcc cagcatcccc tctgcaggac tggaaacagg gaggacttgg tgcttaagaa
     1861 aacgtggtgg ttcagctccc agagccagtt cccaccatct ggtagtaggt tactccagct
     1921 cctcagaacg tctcgccctc ttctgtcctc tacgggcacc acactcgtgt atacaaatgc
     1981 atatttttta ttaaaatttt ctttaaaaaa ctaatatttt atatgtccct gtggcactca
     2041 agaccaaaaa aaaaaaaaaa aaaaaaaggt gcaacatagt ctccactcat cctagacaac
     2101 cagaaggttg gggatttctg agtggactgt ggtgggacca tcaaattgca ccccatccag
     2161 cctttctcaa gagacagtca cactccagta acagcgtgac aggagccagg caaagcaccc
     2221 agtgtctcac agcgaggagg aggcggaacc tccaagcctg gtccctagag gcactgtgag
     2281 gaaaggtcct ccaggtaggc aggagcagag gagggtgaca gtcacacacc caaaccagtc
     2341 gtatgccgaa ggtttcagga gccaagggtt gagaattgca ataaccaaca tttacacaag
     2401 tctgtgactc agccaggccc tgaccccaac aatggagcaa ggtctttgga gccgtccctc
     2461 tccagactga gccagctgag gtacagagca cgaggcacgt tacatcagat acacagcagt
     2521 gtgactccag agctgcagag gctagccttg taaacggtgt ggtgtgccgc acacttagct
     2581 ccagcacttg ggaggcagag gtaggcagat tgagttcaag accagcctgg tctacatggc
     2641 ctattctacg agagccaggg ctatccaaga ccctttattc agaatgggat atcttaagtc
     2701 aagcttctca tgtagcccag gatggccttg aactcatccc acctgcctcc atctcccaag
     2761 tgctgaaacc atgttcaaat gtctagttct tctctaaggg aagggatgca cggtggagga
     2821 aggatccaca agccctcagg cgtgaggtct tagttgcaaa cctctgccgt gcttcttaga
     2881 gaaggctcag cagttagaag cacgagttgc agggttgggg atttagctca gtggtagagc
     2941 gcttgcctag caagcgcaag gccctgggtt cggtccccag ctccaaaaaa aagaaaaaaa
     3001 gaaaaaaaaa gaagcacgag ttcctctggc tactcttagg ggaattgact ttgattccca
     3061 gtacatacat ggtagctcac aactgctata accccagctt caggatgtca acttttagtg
     3121 tctgtacaaa ctacccccta cacatacaca cattacacaa ttttttgaag atttgttttg
     3181 atgagtgtgc atgcgtgcat gcgtgtggac gcgtgtgtgt gtgtgtgtgt gtgtgtgtgt
     3241 gtgtgtgtgt gtgtgcgcgt gtgtgttgtg aatgtgtgcc actggcatgc agggatatgt
     3301 ggaggccaga ggtgacatca atgtctttga aatggttttc caccttatat tttgggtcaa
     3361 ggtctaagat gctagtcaat gagctctagg gagccacctg tcaccacctt tcagcacctg
     3421 gcatcacagg tgcacaccac cacacatctg cacatgcttg ctgaggatct gaactcgggt
     3481 cctcaagctg gcatagcaag cactttaccc accgggccgt ctccccatct ccaggacatt
     3541 acacgtgcta agtaagcgtt ttgccactaa ggcacattcc caggtttctt ttcaattttc
     3601 actttgagat agcatcttgc taaattgcca aggctggcct tgaacttgtg atcctcctac
     3661 ctcagcctcc tataggccta ttccttctat acttctgtga gtattcatta gtgttgctta
     3721 gccatgcgtg ctaggcaaat gctccacagc cgactctgcc cccagcccct tttcactctc
     3781 atttggagac tgggcaagcc ctgagccact gccatcaaga tggtcttgga tttgggatcc
     3841 tcttgtctcg gccttctgag tacctgagat tacatgtctg tgccaccagg acgtttccct
     3901 aagtattaat ggcatctttt gcctctgctg cacctcccct ggttccaggt gaggaaatgg
     3961 ctgccaagta gcagaaataa agtccggaca aatcctcctg aaaacactcc cacctccgcc
     4021 ctgctggatc ctgagaccag cagtgtctcc gctctctgca ctcaggagag acctgatctc
     4081 cctgctccca tgccacctca caggctccgg tgttccttgg ctggcgttga cttgttccac
     4141 caccacccca ctctggcacc agtgaacctg cccggctggt ttgccaggga ggagctgggc
     4201 ctgttgtcat cttggggcaa ttctgacttt tgatttacca gaacttgaga aagtacatgc
     4261 gtgcacgggg tcaaaagtgg gaccgtgtag gggaaattac tacaacctcc tctacagact
     4321 ccacggggct gagaagctcc agatcagccc ctctggtctg actaaccagg ccatggccac
     4381 ccacctgaga tgcttgtccc ttaacctcca ccacaccaca gaatcctcag ccaccagctc
     4441 tgccagacca gaccagacct taggcatcac taaagtctgc gctcctgtca cccagtccat
     4501 gagaaggcct gaacttcccg ctgagccgat caaaggggtg gaaccggggc tgtcaggctg
     4561 agtagaggct gcagggaaag gggaggggct gggagctgtc agattgagca taggcttggc
     4621 agggcgggga gtgggatgct cataaggcgg gtacagattt gtttgctttt ctgtcttttg
     4681 agaacgtttt catatgtagc ccacacccaa ctcaaaccta caagactcag attcctgagt
     4741 gcgggaatta atgctatggg ccacgattcc tgaagtgatg gttagtctcc gtaacttggc
     4801 tagtttagga tcatcatgga aacagacctg tagccaaggg tgtgttgttg aaagacgtaa
     4861 ctgagcaatg gaagacctac cataaatgcg ggcaataccg ttccatttgc tggggttggg
     4921 ggaaggggat ccaacacaga aggatgagta caagcattta cccctctgtg gagggctcag
     4981 tgtgaccagc tacctcacag ccccactacc atgttagtcc cacaccatgt tagcctgcac
     5041 cctcaagctg tgaacaaaaa taaactttca cttaaattgg tttgtttgag acaaggtttc
     5101 actgtggatg gcctcaaact cacagagctc a
//
