LOCUS       XM_006248979            1682 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102546864
            (LOC102546864), transcript variant X1, mRNA.
ACCESSION   XM_006248979
VERSION     XM_006248979.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006248979.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006248979.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1682
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1682
                     /gene="LOC102546864"
                     /note="uncharacterized LOC102546864; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 117 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:102546864"
                     /db_xref="RGD:7673409"
     CDS             365..1336
                     /gene="LOC102546864"
                     /codon_start=1
                     /product="uncharacterized protein LOC102546864"
                     /protein_id="XP_006249041.1"
                     /db_xref="GeneID:102546864"
                     /db_xref="RGD:7673409"
                     /translation="MDRHNMSWIHYPSQVSPAVEDVIAAQSIISRCTHVYVAVCVPLS
                     LVLGLFSLNVFIRDRTRLGVLDRLLAGLTATSISVTLLSLNAAGRPDYISTTNLGCGA
                     LSFFSNVCYFMAQYLQGATLPLAFLPGSPCCQLLARPVASLAAIGGCAVCSALIVVSL
                     LGTFGELHTTTMCQADPLTAWPEYEIVKFSLGFALALSFQMVLFLLYATQPAWRVAPD
                     QRDTASGRWVVLAVALNMFACRLFFNVVLLHRAQLKLWKDVGSPRDELLMNLAELALS
                     GESCINMVAILLLHTPCRLRLLGLLEHLTQRCRRGPDTSMSLNRVGG"
ORIGIN      
        1 ccatttggat tcttcggggt cacatggtcc aaacatagcc cgcttaaaca cagtgtgtgg
       61 tttggacaac tccaggctaa atcctgtttt tccttagaaa ctgtgggcgt ctgtgccagc
      121 ctgtctttgg aaagtgtgga gcaatggagg gaagactgga tgaacaaaga acttgtgcca
      181 gcctcacagc agccccccag tgctgacaga gctttgtttg accccagggc ctagcacagg
      241 tgagcactgt cttatgtcct ggggaggtag gcgccctgct cacccagctt gtcttcctgc
      301 gtgtgactga ccagtgaatg cacccagggc cactctcagc tgtggtctga gaactctcct
      361 gaagatggac cgtcacaaca tgtcctggat ccactacccg agccaagtgt ccccggctgt
      421 ggaggacgtc atcgcagcac agagcatcat ttctaggtgc acacatgtgt atgtggcagt
      481 gtgcgtccca ctgagcctag tgctggggct cttcagtctc aacgtcttca tccgggaccg
      541 tactaggctg ggggtactgg acagactcct tgcaggcctc acggccacta gcatctcagt
      601 gactctactg tccctcaatg ctgctggccg acccgactac atatccacga caaacctggg
      661 ctgcggggca ctctcattct tctctaatgt ctgctacttc atggcccagt acctgcaggg
      721 agccacgctt cccctggcct ttctgccggg atctccctgc tgtcagctct tggcaaggcc
      781 tgtggcaagc ctagctgcta tcgggggctg tgctgtctgt agcgccctca tcgtggtgtc
      841 cctgctgggt acatttggcg agttgcacac aaccaccatg tgccaggcag atccgctgac
      901 tgcatggccc gaatacgaga ttgtcaagtt cagcctgggc tttgcacttg ctttgagctt
      961 ccagatggtt ctcttcctcc tatatgctac acagccggcc tggcgagtgg ctcctgatca
     1021 gagggacaca gcgtctggac gctgggtggt actggctgtg gctctcaaca tgttcgcctg
     1081 cagactcttc ttcaatgtgg tcctcctgca tcgggcccag ctgaagctgt ggaaggatgt
     1141 gggctcccct cgggatgagc tgctcatgaa cctcgcagag ctggccctgt ccggggagag
     1201 ctgcatcaac atggtggcca tcctcctcct ccacacacca tgcaggctca ggttgcttgg
     1261 cctccttgag cacctcacac agagatgcag gcgggggccg gacaccagca tgtccttgaa
     1321 cagagtaggg ggctagccag ggcctgcctg ctggcacagg ccacacccct cgctagtgct
     1381 cagggaagac ggccttccca gggagcctga gcaggcttcc tatgttttgg atggttagct
     1441 tgcctatgtt tacctcaacc tacgcaaatc aagacggtct ctcttcccac accttcagtc
     1501 acacttgagg gacgcagtga cataggtaag gaggctaacc aaaaaccatg ggtctgctgg
     1561 agggtgtcct gacgatgatg gcacatgtaa ccaccttgcc tgttggttgc caccttctac
     1621 gcaacaatcc aggctgacga cacaggaaag gcactgtgga aataaacatg gttttcacct
     1681 aa
//
