LOCUS       XM_039108677             830 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102546856
            (LOC102546856), transcript variant X1, mRNA.
ACCESSION   XM_039108677
VERSION     XM_039108677.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039108677.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..830
                     /gene="LOC102546856"
                     /note="uncharacterized LOC102546856; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 3 long SRA reads, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 18 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:102546856"
                     /db_xref="RGD:7620814"
     CDS             39..368
                     /gene="LOC102546856"
                     /codon_start=1
                     /product="vasodilator-stimulated phosphoprotein-like"
                     /protein_id="XP_038964605.1"
                     /db_xref="GeneID:102546856"
                     /db_xref="RGD:7620814"
                     /translation="MATDPQHPPSRRAGGRAGRRPQGRDSAERRTASCSGGWPPADWG
                     GWTPSPPLPPRPPPPCPRPRPQISAGAAGLRGASGTDLGAEFVHHFSFKDLEPSYIAV
                     DGGADES"
ORIGIN      
        1 cgggctcagg ctgcggcccc gggtcccctc ggcgcgggat ggccaccgac cctcagcatc
       61 cgccgagccg gcgtgcgggc gggcgtgcgg gccggagacc ccaaggccgg gactcggcgg
      121 agaggcggac cgctagctgc tccggcggct ggcccccggc ggactggggc ggctggaccc
      181 cctcccctcc cctcccccca cgcccgcccc cgccctgccc gcggccgcgg ccccagataa
      241 gcgctggcgc ggccgggctc cgcggggcta gtggcaccga cttgggcgca gaatttgtac
      301 atcatttttc atttaaagat ttggaacctt cctatattgc agttgatgga ggtgctgatg
      361 agagttaaac tggccccctt tactgggagc tacttgagac ctccacccta gagtgggaat
      421 agacagacga cgcctgcaca aaacccggct ttgaatccag taacttcgcg ttccagaaca
      481 tccaccaaac aaaaccaagt ttgagatcga ataagaccct tcctggtctg attgtcaatc
      541 ggtcttttct aactcttccc tcccttctcc tttcggatgg tgtttcctca ggcaggatct
      601 agagcaaggg ctatatttac agggcagcct gtaatttctg aattgctgaa aattagcatt
      661 ttaacgatat cagtagctcc ggaaaggagg gagaagggac tgttgcctgc catttggtaa
      721 ttgaaatttg atgggtaaac taattatgcc attattaaca aataaattac ttattaattc
      781 cacctaatgt tgatctttga agtaaatact gatgccgcat tcatactgta
//
