LOCUS       XM_017591373             554 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus tyrosine-protein phosphatase
            non-receptor type substrate 1-like (LOC102546663), mRNA.
ACCESSION   XM_017591373
VERSION     XM_017591373.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086020) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..554
                     /gene="LOC102546663"
                     /note="tyrosine-protein phosphatase non-receptor type
                     substrate 1-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:102546663"
                     /db_xref="RGD:7621135"
     CDS             30..554
                     /gene="LOC102546663"
                     /codon_start=1
                     /product="tyrosine-protein phosphatase non-receptor type
                     substrate 1-like"
                     /protein_id="XP_017446862.1"
                     /db_xref="GeneID:102546663"
                     /db_xref="RGD:7621135"
                     /translation="MKELKVIQPDKSVSVDAGGSVTLNCTVTSLIPVGPIRWFRGVEH
                     SRHVIYDFVGDHFPRVTNASDASKRKNLYFSIHISNVTPADAGTFYCVKFQKETVEPD
                     IEIQSGGGTELLVFELKTSAIVKILAAALLGYKLLLVIAVTLISRHRCKMPECKLGGI
                     KIYKLNICYCDKYP"
ORIGIN      
        1 tttgtttgtt tgtttcggca ggagctaata tgaaagagct gaaagtgatc cagcctgaca
       61 aatcagtttc tgttgatgct ggaggatcag tcactctgaa ttgcacggtg acatctctca
      121 tccctgtggg gcccattagg tggttcaggg gtgtagaaca cagcagacat gtgatatatg
      181 atttcgttgg agatcatttc cctagggtaa caaatgcttc agatgcttca aagagaaaaa
      241 acctgtactt ttccatccac atcagtaacg tcacacctgc tgatgcaggt accttctact
      301 gtgtgaagtt ccagaaagaa acagtagagc ctgacattga gattcagtct ggaggtggca
      361 ctgagttgtt agtatttgaa ctgaagacat cagccattgt taaaatcctt gcagctgcgc
      421 tccttggata caaactattg ctggtaattg ctgtcactct catttccagg cacagatgca
      481 aaatgcctga atgtaagtta ggggggataa agatatataa gttaaatatc tgttactgtg
      541 acaaatatcc atga
//
