LOCUS       XM_039100222             924 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus pre-mRNA-splicing factor CWC22 homolog
            (LOC102546596), mRNA.
ACCESSION   XM_039100222
VERSION     XM_039100222.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100222.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..924
                     /gene="LOC102546596"
                     /note="pre-mRNA-splicing factor CWC22 homolog; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 6 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:102546596"
                     /db_xref="RGD:7730159"
     CDS             397..846
                     /gene="LOC102546596"
                     /codon_start=1
                     /product="stress response protein nst1-like"
                     /protein_id="XP_038956150.1"
                     /db_xref="GeneID:102546596"
                     /db_xref="RGD:7730159"
                     /translation="MTSRENISDSSSDTLSDLDSDDESITTTEEESTTSQTERLCSNR
                     VETTVHEKFPKLMQNIKSVLEKNSEGEKKRKRTILVFYYRQKSKKKQNQEKAKEKVQK
                     QNQEKAKEEVPEESNTSCSTESLSESSTNPESSSSVLPKRRRKWFFL"
ORIGIN      
        1 cttctatgag gatgctccca tctacccatc tactccaatc tcaacgccct ggcattgccc
       61 tacattgtgg aaacaagctt tcacaggatc aagagctgtt cctcctattc atgctgggca
      121 atgccattct cggcttcgta tctagctgga gtcatggatc cctcttcctc ttgcttcagc
      181 ctccatttta tccctgatgc tgcaacctat tttccactct tcctccttga cttcaagcat
      241 gttctcagct tggcccgtgt agattctact ggcttagacc cacaagaata caggtactac
      301 ccacaccaag aaaacccaat aattattaaa agcaatcaag gctatataag agaggtcagg
      361 cctcctgagg ttaacagtag ctgttagagc tacagaatga ccagtcgtga gaatataagc
      421 gattctagtt ctgacacact gtctgatctt gactctgatg atgagtcaat cactaccact
      481 gaagaagaaa gcactacaag ccagacagaa aggctttgct ctaatcgtgt ggaaacaacc
      541 gtgcatgaaa agttccccaa actaatgcag aatataaaat cagtgcttga aaagaattcg
      601 gaaggtgaaa agaaaagaaa acgcaccatc ttggtctttt actaccggca gaagtcaaaa
      661 aagaaacaaa atcaagaaaa agcaaaagag aaggtccaga aacaaaatca agaaaaggca
      721 aaagaagagg tcccagaaga atctaatact tcatgtagta ctgagtcttt atctgagtca
      781 tccacaaacc cagaatcctc ttcatctgtc cttccaaaac gtaggcggaa gtggtttttt
      841 ctttagagac caaatattat acccatacat aacaatgttt ggaaattgtt gattaaaata
      901 taataaaatg ccttgtgaaa acta
//
