LOCUS       XM_006241098           10909 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 709-like
            (LOC102546572), transcript variant X1, mRNA.
ACCESSION   XM_006241098
VERSION     XM_006241098.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006241098.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006241098.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10909
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..10909
                     /gene="LOC102546572"
                     /note="zinc finger protein 709-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 61
                     ESTs, 19 long SRA reads, 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 209 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:102546572"
                     /db_xref="RGD:7531244"
     CDS             153..2000
                     /gene="LOC102546572"
                     /codon_start=1
                     /product="zinc finger protein 878 isoform X1"
                     /protein_id="XP_006241160.1"
                     /db_xref="GeneID:102546572"
                     /db_xref="RGD:7531244"
                     /translation="MESVAFEDVAVNFSLEEWAMLNPNQKNLYKDVMQETLRNLASIG
                     SSLEHHIIENIYRNSWRKLSGQVVEGLYDCKDDHQCAEIFDFTTHSIVNQNSLQGVHI
                     CENSGCATVVIGHLSLSVLLKPDTERASYEEDYGKELYSSEQLGAASNSLTSFENYEN
                     TYTLQRLYKTEQCDEDYRYGQNVEKTFNEDKPFECKQCGKCFSSSRYFRRHERRHRAK
                     KCYICKQCGKAFAFPTYLQTHERIHTGEKPYVCLQCGKTFAHSRSLKTHKRTHSVRDL
                     FVCNYCGKTLRHYSSLQIHTRIHTGEKPYVCKPCGKAFITYRSFRIHERIHTGETPYE
                     CKQCGNTFMRWIQLRKHEIIHSGVKPYACKLCGKSFTCSGSLRTHERIHTGERPYVCD
                     QCGYSFTRLNSLLRHKITHTGEKPYVCNHCGKTFPRSASLQRHVKIHTEEKPYVCKQC
                     GVAFASSTDLLEHEQTHIDEKPYICEQCGNAFVLWSQFQKHKALHAVPVSYVCKQCGK
                     SFTSSRSLKTHERIHTGEKPYECKQCGKTFLWSYSLQRHEKTHTDGKLHVCKQCGETF
                     PYDSHLQVHEKLHFDDEPFNCKYCGKPFFTLNHLHRHELLHTTLDSSVF"
ORIGIN      
        1 tgcagaagcc gaggacacca cttcccgtcc agccatttta ggcgtttgtg tcttctgtgg
       61 agagagaccc gtaggttgtt tccccagtgt ctgtgttcca tccactgact gcgagagccg
      121 ccggagaaca gtaggacacc cggtaactgg aaatggagtc agtggccttt gaggatgtgg
      181 ctgtgaactt ctccctggag gagtgggcta tgctgaatcc aaaccagaag aacctctaca
      241 aagatgtgat gcaggaaacc ttgaggaacc tggcttctat aggaagcagt ttggagcacc
      301 atatcattga aaatatatac cgaaattcct ggagaaaact aagtggtcaa gtggtggagg
      361 ggctctatga ctgtaaagat gaccatcagt gtgcagaaat cttcgacttc actacacaca
      421 gtattgtaaa ccagaactcc ttacaaggag tgcacatatg tgaaaacagt gggtgtgcaa
      481 cagtagtcat tggccatttg tctctgagtg tgctccttaa gcctgacaca gagcgtgcgt
      541 catacgaaga ggactacgga aaggaattgt acagttcaga gcaacttggg gcagcctcca
      601 attctctcac atcatttgag aactatgaaa atacttacac tctacagaga ctgtataaaa
      661 ctgagcaatg tgatgaagac tatcgatatg gtcaaaatgt tgaaaagact ttcaatgaag
      721 acaagccctt tgagtgtaag cagtgtggga aatgtttcag ttcctccagg tactttcgaa
      781 ggcatgaacg acgtcatcgt gctaagaaat gctatatctg taaacagtgt gggaaagctt
      841 ttgcttttcc cacctaccta caaacacatg aaagaattca caccggggag aagccctatg
      901 tgtgcttgca gtgcgggaaa acctttgctc attctcgttc ccttaaaaca cataaaagaa
      961 ctcactctgt tagggacctc tttgtgtgca attactgtgg gaaaacctta cgtcattaca
     1021 gttctcttca aattcataca agaattcaca caggagagaa accttacgtg tgtaaaccat
     1081 gtggcaaagc cttcattact tatcgttcct ttcgaataca tgaaagaatt cacactggag
     1141 aaacaccgta tgaatgtaag cagtgtggaa acactttcat gcgttggatt caattacgaa
     1201 aacatgaaat cattcacagt ggtgtgaaac cctatgcttg taagctatgt ggaaaaagct
     1261 tcacttgttc tgggtccctg aggacacatg aaagaattca cactggggag agaccctatg
     1321 tgtgtgacca gtgtggttat agctttactc ggttgaattc gcttttgaga cataaaataa
     1381 cccacactgg tgagaagccc tatgtgtgta atcattgtgg gaaaactttt cctcgctctg
     1441 cttcccttca gagacatgtc aaaattcaca ccgaggagaa accttatgta tgcaagcagt
     1501 gtggggttgc ctttgctagc tctactgacc ttttagaaca cgagcaaact cacattgatg
     1561 aaaaacctta catctgtgag caatgtggga atgccttcgt gctgtggagt caatttcaga
     1621 agcataaagc acttcacgct gtcccggttt cctacgtgtg taagcagtgt gggaagagct
     1681 tcacttcttc gaggtcactg aagacacacg agagaatcca cactggcgag aagccctatg
     1741 agtgtaagca gtgtgggaaa accttcctgt ggtcttattc ccttcagaga catgaaaaaa
     1801 ctcacactga tgggaagctc catgtgtgca aacagtgtgg ggaaactttc ccttatgaca
     1861 gtcatctgca ggtgcatgaa aaactgcact ttgacgatga gcctttcaat tgtaagtact
     1921 gtgggaaacc cttcttcacg ttgaaccatt tacatagaca tgaattactt cacactaccc
     1981 tggattccag tgttttttag taatgtgaga tttttttttt tttttttttt tttttttttt
     2041 gtgctcggtg gctttcatag aaaaagcaaa atgatactgg aaaaagactg gatttgtgtt
     2101 agcaatgtag aaaaaccttt tggtttgttt cattgaaaca catgagatgt cacgttgaga
     2161 agaaatcttt tttaaaaaaa ataatgaaat atacaaatag tttttgagct tatagctcct
     2221 tgaagtacat caaagagaaa tgggcctgtg gctacacgca gtatggtaaa gccttgtgca
     2281 gtcccagatc ttggaggaga cagaagaaaa ctcacgctgt atagagactt tatgtatgtg
     2341 tatgcggtgt tgtagaaaag ctcttctctg cttccctatt ccctctgaat acttggaagg
     2401 agtcactgtg gagagaaacc cttcatgtat aggcaatctt ggatagtctt gggttatcac
     2461 atcctcttat agacatgaaa gaacctactg tagggaaacc ttaaaaacag gatttgtgaa
     2521 ctctcatcag cttcatagaa ctcacaagaa tgtacatggg gagaattcct atcaggacaa
     2581 acctatatga acaccatttg gttcagtgaa cacacaagga aagaacttga tacggagcgc
     2641 taatcttctc agaagagatg ttcacggttt catttggcac agatggaaac gcataccaga
     2701 tgaaaacctt tgctgttgaa aaacattgaa aaatctagag cagtagcgaa taaaggaaaa
     2761 gtcctttgaa tttttttatg tttaatctga taaatgtcag tattatgaag gactggacac
     2821 attattatta ttttttgtag catgatccag gaaatgcata ctctgaagag aatgttatca
     2881 gtatagtatt tgtatttatt gaaaaatttc aggggcttat agggatgagt tagcctttaa
     2941 gagcatttgc ttcacagcac catgtcacgg agctcacaac tgcacgtgac tcagttacag
     3001 gagatcaatt cctccctcac acacttgtac acataaaaat aaaacttaaa tatttttcta
     3061 gttttttttc cccctagaaa agctttgttg tgtatcccag gttgacagga aactgttaat
     3121 cttccagctt gtagcttttg aatgtttaaa atgaaatgcg tgcttccaca ctcactgtca
     3181 ttagctcctg tttaagagtc catctcttgc cttgtcttta aatttactct acagaagcaa
     3241 gcagtaagca gagcattgag taatgtggaa tggcagctta aacgcatgaa ctgcaaacca
     3301 gtaagaccta catatgaaaa aagctgacag gaatagaaag tacattttac atttgtgaga
     3361 ttccttaaag taatcacgtg ttaatttaat gagtgaggtc tttttgtatc aaataaggta
     3421 gatgcttctc attgtaaatt atgttggatt cattggtgaa ttgatatttg aagtttgcca
     3481 ttccacataa acatttttaa aaagcattta gtatttgtgt gcgagcatgt aagcatatgt
     3541 cgacatatgc ccatggaggc tagaatgctt tggagatgca ttgcagacat tgtgacatgt
     3601 ttgatgtgtg tcatgggatg gaaatcctag tcttcatgat tgaacagtaa gtattcttaa
     3661 ctgctcatcc gtccctcaag cccctgcata aatgtcttgt ttttcaatca tgtttaatgg
     3721 tagttaaaga aaatggcttt gtgaatattg gaatagtctt gttggtttta tttggctgat
     3781 tataagcatt ttgtgtatac gctcattttt catgaaaaaa aatgtgtgcg tggatgagtg
     3841 tgcattgggg ggcattgttt gtgtgttgct ggtatggttg gtggtgctca caaagtgaac
     3901 aaagtaatat attgggtatc ttgctctatc actctgtccc ctcacaacag ggtctcactg
     3961 agcctggagc tgggcaggca gccggcagaa gcatttcttt actcttgttg agtatagaga
     4021 cactgtagaa gttggatctg gttcttcctt tcagcctcat gttcccagaa ataagactca
     4081 aaatatattt tcaaatacct tagccatatt gctaagctct tttctgacta gatcgtaagt
     4141 aaagacaacc cttttctttt aatctaacat tctgctatgt ggctggttac ctgtgctgag
     4201 gtaccttgcg cctgtctagt cacattttcc tgggcaaatc tgcttctggc tctatcccag
     4261 aatcttttct gcctcctgat gtcccacctt ccatttcctg tctaaactat aggccatggg
     4321 ctttttaatt gaccggtaca atactgaaga tattttctct agagatgtac tcagtcattc
     4381 ccagggaatg aaacttgatt cctcatgatt gcacagcaag tgggctcccc actcagccac
     4441 ctcctcagaa ctaagccagt tttaaactga ttttgtctct tttgtctatg ttgctctctg
     4501 atgtgttctc acaatcctga gtatgtgttc tttttgcttt gaagtatttt caaaatagtt
     4561 ttagaatagc aaatgttagg gttgattttg tttttcctat tcagaaggta ggtataagta
     4621 tattgtaatc ataggtcaga ccattctcca agttggctta tttcttactt ttgagagtgt
     4681 catatacata tacaataaaa gataaccatg tgtatccact gctttctcct tccagccctc
     4741 cctatttctc ccccaccccc acttaactgt ctttaacaat aacctactag tctagttagt
     4801 gtaactcata catgcacgag tatggagcat ccactagagg atgggtgacc tgccagtatt
     4861 tacatctcca caagtgattc tccgtcccca tgttcactgt cagtagcttc tcagtaaggg
     4921 acatgctggg atttggctta cagtgtaatc ttacaatgta gggcttgtgc atgcagtcac
     4981 ctttgctgag ttcagggtta ctgtactcac gtcagacaca agcagcagaa acccccagca
     5041 tttcacggca ctcctccttc cctctggctc ttctattctt gttgcttttt ctttgatttt
     5101 tcgctgagct ttgctgatgg cggagattaa tatagctgtc tcatttagag gtgaacattc
     5161 agtctctttc gtagcccttt gaccagttgt gcaccactcc attgacagct gtccactata
     5221 aaaagaagct tttctgacca aagttgagag cagtcacgtt ctcttggtgc caagagctga
     5281 atggatggca ggaacttagt ttatagggtg ttttgttttg ttttgttttt tcagatggtg
     5341 tcatgcttca tggccttggc tagcctaagt aggccagatt attgtcaact tgtgcttaat
     5401 ttttatttaa gtcatgaact attagtgtat gtgtgtgtgt tttatgtaat tttactgtgt
     5461 aaaatttgct tttcatgtgt atttcatttt cattgtaact tctctagtta ttacactaag
     5521 agatatattg gtagtactgc cttactaaaa ccatgtgttc aataaattta ctctgtatac
     5581 atggtaagtg agtggctcat ctataaaagg attctccata ttgcttcagg caaaactaac
     5641 gttttaattt ggaagtctta caaggattgg ttctgtagtt cagtgttccc tgtgttggat
     5701 gcgctgagtg gtgactatag ttctgctctt ctaatcacaa cggttgttat ccagaagact
     5761 gagtgctgga ttaaagggag atggaagtcg tgagatgtgc tagttagtcc accagtgaga
     5821 agaaggtact ttcctatttc atgaatcaga atgttttaca gttttaactt aaggtgtcct
     5881 tttagaatgc ttttctgttg tagtcattaa ggaacattgc ttaccggtag aggcttggga
     5941 caagggagaa gatgtacctt gctttgtgag gtaaacaata gtgttctgga tcgtttttgc
     6001 atttcttagt tcctatataa acactaatat ttactataat atgatggatg cactcgtcca
     6061 catatatagg tgtgcctaga gtttccctaa cattacatta tgctaagtaa agtgagaata
     6121 caagaaaagc actttacact caacgtagtg gtcatcacac cttagatgtc tacaacaaca
     6181 attttgccca cacttatgtt ttccttaagt tggaaaaagg ggctttttct ttgtatagaa
     6241 cgtttttatt taaacctttt tttaaaaatt gttagcttgt atgctggcaa agctgtaggt
     6301 tttcagatga cattgtgacc caggtttcca tgtactttaa ccataatcac tgtttcttgt
     6361 tctttttctt ctccctagtg gttctgttct cccaaacaga ctcacttaga ggttcatttc
     6421 tctagttaaa gtctagactc tgctctgtat agaaggaaca ccatttggag atgagtcgtc
     6481 acttacatat tgttctccag tttcctgcta ataacaaaca gttcttggtg acctagtcta
     6541 taaaaattga aaaaaaatta gtttatctat tgatgggcac ttaggctgag atgggcactt
     6601 tggctgattc tataaccgag tgcagtgaat tgtgtaggaa cccaagtaca agtgtttcta
     6661 gtatactctg acttagtata ttgtatacca aacaatagta cagcaggatc ataagatagt
     6721 atattttgat ttttgatgaa attctatttt ctagagtgac catgctagtg ctcatttcca
     6781 agagcagctg taataggctc accaatttgt gttgtagttt ggttccttga tagctattca
     6841 cactggggta attgtattaa gaattttcat gtatttatta gttatttgta cattgcttga
     6901 gaatagattg tttctctttg tgttggttca gttacttgtt cacttgtaat ttttgttgcc
     6961 ttgtactgat tttttcatca catgtttcat gtaccttaag tttttaagct tggggtgtgt
     7021 gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgagc tttttgtctg tatgttaatc
     7081 cttcgtcaga tgaatgagag tccaaagata ttttccccca ctctatggct ttctccaaca
     7141 attgctcctt tttctttata agagctcttt aacttcttac gatgattaac tcccatttat
     7201 actttgggaa gtttattttg tttgttttgt ttttaacatg ggttcttgct ttgtaggcct
     7261 gactggcctg gaatttgctg aatgcatgag gctagcatct gatttacagc attcttcctc
     7321 tttttctggg tgtcaacatt gtcgccatga gcctctaatg tccatttcct gtttgtcgtg
     7381 cctcctgtaa actgttagat tgagaatgca tggtcctctt ggtcttttgc tccgctcttg
     7441 ctcgtgctct tcccttcctg cttccattct ctccctgttc cattttcccc ctctttccat
     7501 gtgctcatgg ccagcctcta cttttctatt cctcttctct actcctctct ctctctgcct
     7561 ttctctaccc caactaccct cttaactcct ctccccatgc cctgaataag ctctattcta
     7621 tactaaaaga aagttttaaa aaaagaatgc cactgtccac acctatagct tcatgtattc
     7681 tgtagatttt cctctgagtt tcaagttttg taggccttac gttaaggtct ttggtatagt
     7741 gtgtgttgct tttatacaga atgatagagg aatttaggga tcttcttgta tgtacagtgt
     7801 tgatttcctc ttgaggccat ttattatcct gtgcatgatt tggatacctt tgctgaaatt
     7861 agaaggtgtg acgacatggt tattctggta ctatacctgt ccattgctca gtgtgtctgt
     7921 ttttaagtta tactatttca ctctggttta gagcataatt taaatcggtg tcgtattagc
     7981 tagtattgct cttttgctca gcattgcttt aactatatgg aatattttgg ttttcattca
     8041 gttacaggat tgtgttttct atttctggaa ataatgacat tggaattttg agggagcatg
     8101 tgtgttgggt ctgaacactt tacacctttt catattatgg tggtgatgtg ggagcatagg
     8161 aatgttttcc attttctaga gccttcaatt tctcagtgtt ttaaattgtc attatgtagt
     8221 cagcttgact tttgtaggtg aatttgactt tttgtcttgt tacttgtttc ttagactttt
     8281 ggaagatgat ttttttttaa attattttat caccattttc attgtcatat aaatggatac
     8341 tggtttttct atactgactt tattgtacta ctttgaagta ataattggac gtaagagtct
     8401 tagtgtggca ctttgggtct tttaagaata tgaacagagg agcagtcaag agcactggct
     8461 cctctcctag aggactgagg cttgattccc agcacctata tggcatttca caactgtaac
     8521 tccagttcca aggaatctaa caccctcttc tgatctctgg gcaccagaca tgcacatggt
     8581 gcatggacag acatgcaggc aaaacactta tacacatgta gtaataagtt taataagatt
     8641 gtcatattgt tcataaatag agatttggct tcatttgact tctgttttct ttcctcagtg
     8701 ctcagggttg aaccaaggag cttatgtttg gtaggcaagt ggtgtaccac tgaactgaag
     8761 ccatagagtt ctatctccat tctcttccta cattttccag ctaagaatgc aagagatgtc
     8821 tatggcaatg tagagaaggt agacacctgg tgtaacttct gatagttgaa gagatgcttt
     8881 tagttttcct gttcagtata atcttggctc tagttttgtc atgtgtaaca tctcttacag
     8941 tgaggtgtct tcctaatttc aggatatttt catcagggaa catagagcat tgatgttttc
     9001 tctgtgtatt gaggctctca atccttgaat atctatattc tctacatttg ctaattgata
     9061 tttgtggaaa catgcttaga tgcaaagaat tcaccccatt atagttggtg atgtttttat
     9121 tatgttgact tggtttgaga atataatctt gaaatttttt ttctattttc attcaggaaa
     9181 ttgtgttaca gttttctttg ttgttgagcc cttcatggtt ttggcatcat ggtaatccta
     9241 ctacctttta agaataactt acttagtgtt tcttcccttt atatttagtg aaatcgtttg
     9301 ggaagcttgg tagaattcat tggagaattt gtcaagtcct gtgctttcct tgtggagaca
     9361 attcatttct agcttaagga tgttgttgcc cttttacatt gttcacattc ccttgacttg
     9421 tttttccatc tgtttgtttt gttttatcat tgattgagaa ttttatacat gtacataatg
     9481 cattttgatc gagcccacac actcccattc ctttctctct aattcttcca tccttcccac
     9541 cactcaagtt ctcaatttca tctgttcttt tatttttaac ctacagtcag tctccttagt
     9601 gcttccagta tatacatggg cgcagtgcta tcttctgtgg catgagtagc ctctccctga
     9661 acaaacccac ctctctttta ctcagcagtc atcaattgcc aataactact caggagtggg
     9721 cctttctgca cacctctcac ttccgtgctg ggacagttgt ctggcttgaa cttgtgtatg
     9781 ccgtcacagc tgttgtcagt tagtatgtgc aactgtcctg ttgtatcgag aacacactgt
     9841 ttgactgtaa taatccactt tctggctctc gcagtccttt ggcttcctaa tccataataa
     9901 tccctggtcc tttgagagaa gaaatgtatt gtaggtagat gctccattta gagctgagcc
     9961 cttcaaaatc tcttactctc tgcatgttga cccattgtga ggctcttaat tgccatcgac
    10021 gtcaaagaca acaaagccca tcttctgtga cgaagataaa ttttcaatgg gtaaagatac
    10081 atacccttta acagaataat agtagattag tagaaagttc tccacattaa tgctgccaga
    10141 cttgcgtttt atcttgtgga ttgtgtgaaa tgggcctgaa atccagtcaa aaagtggttg
    10201 gttattctaa catccatgcc atgctcatgg ccatgtcttg tcagactgat ctgtaattgt
    10261 agctcagagg cttctcagtc gggtgaactt gatgttaggt cttctcccct ggtagcatgc
    10321 acagcatcat ctagcactat gacagctagc cagaaggatg aagcttctag ggcagtataa
    10381 gctatgattt cctaattgct ctatgacttg atgtgtggtg ttttcagtaa taaggtctta
    10441 ctgtcaagtt ctgtgtggta accaagaaca atcgcaatag cctatgatat gtggaggggg
    10501 aggcttgtga aacctccaac tttggcctaa ttttgatatt tcatatatgt cttgaaattc
    10561 ttcacgattt tccagtttat tgtatgtttt caaagaatcc tcagatcatt ctctggattt
    10621 cattttctat gtattataat ctctctcttt tctgctctaa ctttattcat atgaataagt
    10681 atataaaaga aatcataaga taatgaagta cttaaatttt ttaactatta tgacggcctg
    10741 aaagttgtgt gaggagcagc tacagggttg aagttttttg agtggtcacc ccttctcagt
    10801 gtactttttg gtgatgcaac tgactttgag tcacccttat tcctgtaagt aatcccttat
    10861 tgatactcct gtaagtaaat ctcaataaaa tcattgttct ccaacttga
//
