LOCUS       XM_039101513            2184 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102546375
            (LOC102546375), transcript variant X9, mRNA.
ACCESSION   XM_039101513
VERSION     XM_039101513.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2184
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2184
                     /gene="LOC102546375"
                     /note="uncharacterized LOC102546375; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     2 Proteins, and 98% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:102546375"
                     /db_xref="RGD:7693175"
     CDS             378..1907
                     /gene="LOC102546375"
                     /codon_start=1
                     /product="sperm motility kinase Y-like"
                     /protein_id="XP_038957441.1"
                     /db_xref="GeneID:102546375"
                     /db_xref="RGD:7693175"
                     /translation="MPTETEEELPTPTPEPSISEEGNFHSQYQVLGTIGQGGNAKVLL
                     AHHRLTGTPVAVKVLRKDKQWFQPAMMEANIMRKINHPNIVSLIQVIEKETRIYLIME
                     LVEGQELYQYIRESGHIEEDEARQIFEQILSAVSYCHGKGIVHQDLKLDNIMIDKNKK
                     VKVIDFGLSTQFQPGKMLNHHCGTYSFGSPELLLGHRYDGPKNDMWIIGVVLYCMVVG
                     KLPFDSVIIQELQRQVVAGVYPAPCGVSKELEDLLSKLLRVNPNFRPTARKAMKHPWF
                     KEHWNGLIGPYEELLPLTPDPAILDAMKSIGFQASVVKHSLKQRKYNEEMATYFFLQK
                     QALQGDGCTAQAQQVRPVAAPFPSLDPAAAFRLEPKRSGSLPVLGTLRVSSSHGHVSH
                     YGQNAHPKGGKRSTVAGRLRPLQMTPAQDHYHKCAVSVSCIQTTSIFTEKSSNKEINE
                     DNPLSHRAPLEDKPIPSRVRHRGFKGWTRNIAHALVKLCCCMPRRKKPHLGQNRISPQ
                     K"
ORIGIN      
        1 tacttcttct tgtgcgtgag tgtgtgtccc tgtgtgtgtg tgtgtgtgtc tgatgtgtgt
       61 ttttccacgt ttgcttgtgt gtaagtatgt gtgttttgtg tgaatctggg tgtttgtaag
      121 agtttgtgtg agtataagtt cacttctgtg tatttccttg tgagtgcctc tgtgtgtgcc
      181 tgtggtgtgt gtttgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtctgtgc ctgtgtgtgt
      241 ttgtgtgtgt ctgtgtgtgc acgtgcccat ctccttttgc cccttgtatc tatattacct
      301 gcacctcagt gcaagagagt gtagaggcca aaagtcaccc cggctgctgt tcctgaggta
      361 gcattagtac tgataaaatg cctacagaga ctgaggagga gttaccaacc cctacacccg
      421 agcccagtat ctctgaggag ggcaacttcc attcccaata ccaagtattg gggacaattg
      481 ggcaaggggg caacgccaaa gtcctcctgg cccaccaccg gctcacagga accccggtgg
      541 ctgtcaaagt tctgcgaaag gacaagcagt ggttccagcc agccatgatg gaagcaaaca
      601 taatgagaaa gatcaaccac cccaacatag tgtctctcat acaagttatt gaaaaggaaa
      661 cgagaatata cctcataatg gagctggtgg aaggccaaga actctaccag tacatcagag
      721 agtcagggca catagaggag gatgaggccc ggcaaatatt tgaacagata ttgtcagcag
      781 tgagctactg ccatggaaag gggattgttc accaagacct caaactggac aatataatga
      841 ttgataaaaa caaaaaggtc aaagtcatcg actttgggct tagcacccaa tttcaacctg
      901 gaaaaatgct aaaccaccac tgcggcacgt actcttttgg ttcccctgaa ctcctccttg
      961 gccatcggta tgacgggccg aagaatgata tgtggattat aggagtggtc ttgtactgta
     1021 tggtagtggg aaagctccct tttgattcag tgatcatcca agaactgcaa agacaagtag
     1081 tggcaggggt atatcctgct ccctgtgggg tttcaaaaga actggaggac ctccttagta
     1141 aattactgag ggtaaatccc aactttagac caacagcaag aaaggcgatg aaacaccctt
     1201 ggttcaaaga acactggaac ggattgatag gtccctatga agaactgctt cccctcacac
     1261 cagacccggc cattttggat gccatgaaaa gcattggatt ccaagcctct gtagtaaaac
     1321 actctttaaa acaaagaaaa tataatgagg aaatggcaac ttatttcttt ctacaaaagc
     1381 aggctctcca gggggatggc tgcacagccc aggcacagca agtgagaccc gttgcagcac
     1441 cattccctag ccttgatcct gctgctgctt ttagattaga accaaagagg agtggaagcc
     1501 tgccagtcct tggcaccttg cgggtgtcat cctcccatgg tcacgtatct cactatggcc
     1561 agaatgctca tcctaaagga ggcaaaagat ccactgtggc tggtcgtctc aggcctctac
     1621 agatgacacc tgcacaggac cactatcaca aatgtgccgt gagtgtctca tgcattcaaa
     1681 caacaagcat cttcactgag aagagtagca ataaggaaat caatgaagac aatccactct
     1741 cccacagagc cccattagag gataagccca tccccagcag ggtccggcac agaggtttta
     1801 aggggtggac caggaatata gcacatgccc tggtaaagct gtgttgctgc atgccaagga
     1861 gaaagaaacc tcacctgggg cagaacagaa tctccccgca gaaatgagcc acagggagag
     1921 tccagagaac aagcagcagg catagcccag tgccatcttg aaattctgtc atatcctgtg
     1981 tataaacagg tggtgatttc agacacatgg ccaatgaaaa gacaccagca gaagctacag
     2041 caccaacagg agtaacagca atagcaccag cagcattagc agtagcagaa ggaggaagag
     2101 gaggaggagg aagaggagga ggaggaggag gaggaggagg cagagcagga ggaggaggca
     2161 gagcaggagg aggaggagaa aaat
//
