LOCUS       XM_039080432            3757 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 709-like
            (LOC100912823), transcript variant X4, mRNA.
ACCESSION   XM_039080432
VERSION     XM_039080432.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3757
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3757
                     /gene="LOC100912823"
                     /note="zinc finger protein 709-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     ESTs, 2 Proteins, and 99% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:100912823"
                     /db_xref="RGD:6485596"
     CDS             148..1482
                     /gene="LOC100912823"
                     /codon_start=1
                     /product="zinc finger protein 844-like isoform X4"
                     /protein_id="XP_038936360.1"
                     /db_xref="GeneID:100912823"
                     /db_xref="RGD:6485596"
                     /translation="MAAVTCEDVHVNFTHEEWALLDPFQKSLYKDVMLETYWNLTAID
                     IISVTLDINLVSVKDMERSNVPLQVKDFFKYMKASILKGNPMNVNNAVKSLQIYVIFK
                     NMKKNIPEKNYMNVITVVKPFQVTVLFKYTTEPIQERNPMIVRTVVKHLHVAVIFYNT
                     KELIQERNPMIVRTVVKHFQVAVIFKFIEESTLERNPMDVISVVKPLHIAVLFKNMNE
                     VILERKSMSVINVVKLLHVMEVFKIVKNILLKNHMNVVNVVMPLHIAYIYLKEVVLEK
                     GHSNVLNVVKPFQVIVLFKYMKELIRERSLMTVMNVVKPFQVVVIFTNTKELIQEKNP
                     IIALNVVQHLRIAVVFKNMKKLTLERNLMSVINAVKPLHVVLVFKYMKEVIVERNLMS
                     VINVVKSLQVVVVFDIIENTILLRNQINQCGKAFPCCSHLQTHERNHTGKKL"
ORIGIN      
        1 gcggaacatc agtcggaata gaggcgggaa cttccggtct gccttgcctc tggttgactg
       61 aggaaggctc tcctcggtcc gtgctctgtg ctgggaccct gcttcccaca gctgtgagaa
      121 gagcggggtg aggtcagaat ccgcgctatg gctgcagtga cctgtgagga tgtgcacgtg
      181 aacttcaccc atgaagagtg ggctttgctg gatcctttcc aaaagagtct ctacaaagat
      241 gtgatgctgg agacctactg gaacctcact gctatagaca taatatctgt cactctggat
      301 ataaaccttg tgagcgtaaa ggatatggaa agaagcaatg tacctttgca agtaaaagat
      361 ttcttcaaat atatgaaagc atccatactg aagggaaacc ctatgaatgt aaacaatgca
      421 gtcaaatctt tgcaaattta tgtcatcttc aaaaacatga aaaaaaacat accagagaaa
      481 aactatatga atgtaatcac tgtggtaaag cctttccaag tcacagttct cttcaaatac
      541 acaacagaac ccatacagga gagaaaccct atgattgtaa ggactgtggt aaagcattta
      601 catgtagcgg taatcttcta caacacaaaa gaactcatac aggagagaaa ccctatgatt
      661 gtaaggactg tggtaaagca ttttcaagta gcagtaatct tcaaattcat agaagaaagc
      721 acactggaga gaaaccctat ggatgtaatc agtgtggtaa aacctttgca tatagcagtg
      781 ctattcaaaa acatgaacga agtcatacta gagagaaaat ctatgagtgt aatcaatgtg
      841 gtaaagcttt tgcacgtcat ggaagtcttc aaaatcgtga agaacatact cttgaaaaac
      901 catatgaatg tagtcaatgt ggtaatgcct ttgcatatag catatatata cctgaaagaa
      961 gtagtactgg agaaaggcca ttcaaatgta ctcaatgtgg taaagccttt ccaagtcata
     1021 gttctcttca aatacatgaa agaactcata cgggagagaa gccttatgac tgtaatgaat
     1081 gtggtaaagc cttttcaagt cgtagtcatc ttcacgaaca caaaagaact catacaggag
     1141 aaaaacccta tcattgcatt aaatgtggta cagcatttgc gtatagcagt agtcttcaaa
     1201 aacatgaaaa aactcacact ggagagaaac cttatgagtg taatcaatgc ggtaaagcct
     1261 ttacacgtcg tgctagtctt caagtacatg aaagaagtca tagtggagag aaaccttatg
     1321 agtgtaatca atgtggtaaa gtctttgcaa gtcgtagtag tcttcgatat catagaaaac
     1381 accatactgt taagaaacca aattaatcag tgtggtaaag cctttccatg ttgcagtcat
     1441 cttcaaacac atgaaaggaa tcatactgga aagaaactat gagcgtaatc aatgtggaca
     1501 agcctttata tatcacagta gtcttctaaa tcacaaaacc aatgtcatat ggagaggaac
     1561 cctacaaatg taattgatgc agtaagcttt ggcattggca gatagttgct tcaatcatgt
     1621 catgtgtgga attctggaga cttttcagag ggcatatata tatatatata tatatatata
     1681 tatatatata tatatatata tatatatata tatatatata catgctatgg cttcaagagg
     1741 cagtgtgggc tgatggttgg tagttgaatg ctattgctca aagaaacaac aaatcagata
     1801 tcctgatggc aagatcaact ttgtctcaag gaactcagga ctcctaatca gcaggtttac
     1861 cgaagtgtca gggctactgg aaaaattgcg gatggaggtt gcagcacttg ggaaactaca
     1921 cgcattggaa aagggagaac aaaaagcctc agtccaagtg actacacaag acagcaggac
     1981 tttctgacaa gaataaaatg ggaaagaaac tgctctggag ggtcctccgg tcagagaaaa
     2041 gctgaaaaga aaggatggca gtctgatgaa acagctgata tcaagagaaa gggttaatct
     2101 caaaacagtt gtgccaccag ggtgggaggc agggcatcct ggagttacaa aatcaccatc
     2161 atctttccca gtagtcatgt agcatatgcc ttctaatagg gtgaagaaaa gttatgacaa
     2221 ggtaggatag agtcctgttg atgtcctcat cttatgtgaa acaaattcta aatgactgct
     2281 ctactcaaaa tagaaatata cctttgcaca tgctgaaatc aatagtatgt atgaatatca
     2341 aaaagtgaaa tagtgtaagg ggaatgaata tagtaaaaga ccaattggta ggcaaagggc
     2401 agtactctga catacaagaa caaaagcaat tcagttctgt tactatagaa caatgttgct
     2461 tagtggattt aagtcctttg gacaaatgat ataagataat gatttaagaa tgatataaga
     2521 tccacctcat tcactgaatt tctttttttc aaaacaaata ttagtctcag ctgtaaagaa
     2581 ggccctatca gatcctgatg taagacaggt gttgatagag accttggcag aggaaaatgc
     2641 aaatacagaa tgtaaagaag gtattacacc atcaaagact tggaaagcac acatggatga
     2701 gtggataaag tatgaaacca atattggttc taacttgtat catgttcata gcatagataa
     2761 aactatagct agaagtctct aatatcaaaa tgcatcaatt gcatgaaata cactcatttg
     2821 aagagatggg taccaagcca ttaaagatct cagattacaa aatggcagtg tgttaaatgc
     2881 aaaaaatatg gtacttggca cagaataagt aaacaaggca tctttaaagg taatggtttt
     2941 tctaaatata cactagaaga aacagcctag tcatggaagt atgtacaggg aaggtggcag
     3001 gggtttacat tggaccaatg caagcttctg caggctgtgc tgctctatac ctggccatag
     3061 ataaacatct tactgtaccc accaaaactc aatgttataa aatatatact ggagtttatg
     3121 gtcttttgcc tgccaggaca gtaggaatga tcttggaaat gtgcagattg actcctcaag
     3181 gattcattgt tcatccaaaa attaaagatg aagatttcaa aagagaaatt aaaattatag
     3241 cctatgtgaa aacagagatg gcatttaatg caggtggtag gaattgctga gcttctactg
     3301 tttccctaca tcaaagccaa aatgggtcaa gtaaaaacag gagggttgaa gtactagaaa
     3361 acatgttctg ggaaacagtt gttaatgatc agaggccaaa attaaaattg caagtaaatg
     3421 gtattgaaat agtaggtttg gtggatacag gaatgtaggg cgccctccag tggtgaacaa
     3481 cggtactgcg catgcacagg ttttgcactt ggtgtcagtt ggccagtaat atgctaatga
     3541 ggggcggtac catgctagtg aggtgattca ttccccgcca atccccggag gacaagtagt
     3601 ggggtgatag tgggatgaca gtggggtgat agtagggtga cccgtgcccc accaatccct
     3661 gaaggattat tagcatactg ttgtgtatat aaggcgagca cttttgacgc tcgacgtccc
     3721 ctgtcccctg tacaataaag gcttgttcgc agaagaa
//
