LOCUS       XM_008763958            1606 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus cytochrome P450 2J3-like
            (LOC100912642), transcript variant X1, mRNA.
ACCESSION   XM_008763958
VERSION     XM_008763958.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008763958.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008763958.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1606
                     /gene="LOC100912642"
                     /note="cytochrome P450 2J3-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     15 Proteins, and 96% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:100912642"
                     /db_xref="RGD:6486125"
     CDS             42..1295
                     /gene="LOC100912642"
                     /codon_start=1
                     /product="cytochrome P450 2J3-like isoform X1"
                     /protein_id="XP_008762180.2"
                     /db_xref="GeneID:100912642"
                     /db_xref="RGD:6486125"
                     /translation="MSSVIISSLPLIKEAFSHLDENFINRPIFPLQKHIFNDNGLIFS
                     SGQTWKEQRRFALMTLRNFGLGKKSLEQRIQEEAHHLVEAIGEEEGQPFDPHFKINNA
                     VSNIICSITFGERFEYHDSQFQELLKLLDKAMYLGTPMMIHLYNMFPWIIKHLPGQHQ
                     TLLATWGKLKSYIADIIENHREDWNPAEPRDFIDAFLNEMAKYPDKTTTSFNEENLIC
                     STLDLFLAGTETTSTTLRWAVLYMALYPEVQEKVQAEIDQVIGQEKHPSLADRDSMPY
                     TNAVVHEIQRMGNIVPLNVPREVAVDTTLAGFHLPKGSVVMTNLTALHMDPKEWATPD
                     VFNPEHFLENGQFKKRDSFLPFSMGKRACLGEQLARSELFIFFTALMQKFTFKPPTNE
                     KLSLKFRLGITISPVSHRICAVPRL"
ORIGIN      
        1 tgaagaagta tggaaatgtt atcagtcttg atttgggaat catgtcttca gtgatcataa
       61 gcagcctgcc tttaatcaaa gaagcctttt ctcacctgga tgaaaacttt ataaatcgcc
      121 ctatatttcc tctacaaaaa cacatcttta atgataatgg attgatcttc tccagtggcc
      181 agacatggaa ggagcaaagg aggtttgccc tgatgactct gaggaacttt ggattgggaa
      241 agaagagctt agagcagcga atccaggagg aggctcacca tcttgtggag gccataggag
      301 aggaggaagg acagcctttt gatcctcact tcaagatcaa caatgcagtt tccaatatca
      361 tttgctccat cacctttggt gaaaggtttg agtaccatga cagtcagttt caggagctgc
      421 tgaagttact ggataaggcc atgtacctgg gtactcccat gatgatccac ctctacaaca
      481 tgttcccatg gataatcaaa catctcccag gacaacacca aaccttgttg gctacctggg
      541 gaaaactgaa atcatatatt gctgatatca ttgaaaatca ccgcgaagac tggaaccctg
      601 ctgagccgag agacttcatt gatgcttttc tcaatgaaat ggcaaagtac ccagacaaga
      661 cgactacaag tttcaatgaa gaaaacctca tctgcagcac cctggacctc ttccttgctg
      721 ggacagagac aacatccacg acactgcgct gggctgtgct ctacatggcc ctctacccag
      781 aagtccaaga aaaagtacag gctgaaattg accaagtgat tggccaggag aagcatccca
      841 gcctggctga cagagactct atgccctaca ccaatgctgt tgtccatgaa attcagagaa
      901 tgggcaatat tgtccctctg aatgttccca gagaagtggc tgttgatact acactggctg
      961 gattccatct gccgaaagga tctgtggtta tgaccaactt gactgcattg catatggacc
     1021 caaaagagtg ggccacccca gatgtgttca acccagagca ctttttggag aatggacagt
     1081 ttaagaagag agactctttc ctgccattct caatgggaaa gcgagcttgc cttggagaac
     1141 aattggccag gtctgagctc tttattttct tcacggctct catgcaaaaa tttaccttca
     1201 agccgccaac caatgagaag ctgagtctga agttcagatt aggcatcacc atttctccag
     1261 tcagccaccg catctgcgct gtccctagac tgtgatgttg gagaagaaaa ggagaacagg
     1321 aagaactgaa gaactcactg agccactgcc gtgaagggag agaaagaagg tgactgggaa
     1381 agctggaaag aattagacta aagtcagtgg accatattct ggactactga gacctccaaa
     1441 ttggttgagg ataaataact tatgtgctca atgataaatc ttttcatcta caagttgcaa
     1501 agaaaataat ggttcttcct gtgaaaagtg cttgtaaata tgaaatggtg atacaccaac
     1561 agcatagaaa tcattgtcat gtcataaaat tataccttca atttgc
//
