LOCUS       XM_039087864            1029 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus keratin associated protein 4-3 like 1
            (Krtap4-3l1), mRNA.
ACCESSION   XM_039087864
VERSION     XM_039087864.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086028) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..1029
                     /gene="Krtap4-3l1"
                     /note="keratin associated protein 4-3 like 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 49 Proteins"
                     /db_xref="GeneID:100912549"
                     /db_xref="RGD:6486207"
     CDS             1..1029
                     /gene="Krtap4-3l1"
                     /codon_start=1
                     /product="keratin-associated protein 4-11"
                     /protein_id="XP_038943792.1"
                     /db_xref="GeneID:100912549"
                     /db_xref="RGD:6486207"
                     /translation="MVSSCCGSVCSEEGCGQGCCQPSCCQTTCCRTTCCRPSCCVSSC
                     CRPSCCVSSCCRPSCCVSSCCRPQCCQSVCCQPTCCRPSCCRPSCCISSCCQPSCGGS
                     SCCGSSCCRPCCRPCCCLRPVCGQVCCQSSCYRPTCVISTCPRPMCCATPCLLIRTST
                     SNTMVSSCCGSVCSEEGCGQGCCQATCCRTTCCRPSCCVSSCCRPSCCQPSCCRPSCC
                     QPSCCRPSCCQPSCCVSSCCRPSCCQPSCCVSSCCRPSCCRPQCCQSACCQPTCCRPS
                     CCISSCCQPSCGGSSCCGSSCCRPCCRPCCCLRPVCGQVCCQTTCYRPTCVISTCPRP
                     MCCATPCC"
ORIGIN      
        1 atggtcagct cctgttgtgg ttctgtctgc tctgaggagg gctgtggcca gggttgctgc
       61 caacccagct gctgccagac cacctgctgt aggaccacct gctgccgccc cagctgctgt
      121 gtgtccagct gctgccgccc cagctgctgt gtgtccagct gctgcaggcc cagctgctgt
      181 gtgtccagct gctgcaggcc ccagtgctgt cagtctgtgt gctgccagcc cacctgctgc
      241 cgccccagct gttgtcgtcc cagctgctgc atctctagct gctgtcaacc ctcctgtggt
      301 ggttccagtt gctgtggctc cagctgctgc cgcccctgct gtcgcccttg ctgttgcctg
      361 agaccagtct gtggtcaggt ctgctgccaa agctcttgct accgccccac ctgtgtcatc
      421 tccacctgtc cccgccccat gtgctgtgcc accccctgct tactaatcag aacctccacc
      481 tccaacacca tggttagctc ctgttgtggc tctgtctgct ctgaggaagg ctgtggccaa
      541 ggctgctgcc aggccacctg ctgtaggacc acctgctgcc gccccagctg ctgtgtatcc
      601 agctgctgca gacccagctg ctgccagccc agctgctgca gacccagctg ctgccagccc
      661 agctgctgca gacccagctg ctgccagccc agctgctgtg tgtccagctg ctgcagaccc
      721 agctgctgcc agcccagctg ctgtgtgtcc agctgctgca gacccagctg ctgcagaccc
      781 cagtgttgcc agtctgcatg ctgccagccc acctgctgcc gccccagctg ctgcatctcc
      841 agctgctgcc aaccctcttg tggtggttct agctgctgtg gctccagctg ctgccgccca
      901 tgttgccgcc cctgctgctg cctgcgtcca gtctgtggtc aagtctgctg ccaaaccacc
      961 tgctaccgcc ccacctgtgt catctccacc tgtccccgcc ccatgtgctg tgctacccct
     1021 tgctgctga
//
