LOCUS       XM_039095487             842 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC100912436
            (LOC100912436), partial mRNA.
ACCESSION   XM_039095487
VERSION     XM_039095487.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039095487.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..>842
                     /gene="LOC100912436"
                     /note="uncharacterized LOC100912436; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     3 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:100912436"
                     /db_xref="RGD:6486936"
     CDS             60..>842
                     /gene="LOC100912436"
                     /codon_start=1
                     /product="uncharacterized protein C3orf38 homolog"
                     /protein_id="XP_038951415.1"
                     /db_xref="GeneID:100912436"
                     /db_xref="RGD:6486936"
                     /translation="MSGLSHLESEGCRNLLGMLDNDEIMALCDTVTNSLVQPVDRQDA
                     IRAILVYSQNVEELLRRKKVHREVIFKYLATQGVVVPPTTEKHGLIQYAKSYWEEQSP
                     KLKETAEPVKKTEDSQLFEQQAKEDKEAEKVDCRRLGEEFCHWFFELLTSQNPFLGPP
                     QDKWGPQHFWHDVKLRFYYNTSEQNMTDYEGAEMVSLRLLSLVKEEFLFLSPNLDSQG
                     LKCASSPHGLVMVGVAGTVHRGNSCLGIFEQIFFLYFSCGFFF"
ORIGIN      
        1 cgcgggcggt gagggcgaca ttggtggcgt cgtcctctgc ccccttcccc gggggcgaga
       61 tgtcggggct cagccactta gagtcggaag gctgccggaa tctactcggc atgctggaca
      121 atgacgagat catggccctt tgcgacaccg tcaccaacag cctggtgcag cctgtggacc
      181 gccaagatgc tattcgtgca atattagtgt acagccaaaa tgtagaagaa cttctgaggc
      241 gcaaaaaagt ccaccgagaa gtcatattta agtatttggc aacacaaggg gtggttgtac
      301 ctccaactac tgaaaaacat ggtcttattc agtatgcaaa aagttactgg gaagaacagt
      361 ctccaaaact gaaggagacg gcagagccag ttaaaaagac ggaggacagc cagctctttg
      421 agcagcaggc aaaggaagat aaagaagctg aaaaggttga ttgtcgtcgc ttaggagaag
      481 aattttgtca ctggttcttt gaacttctta cttctcagaa tccttttttg ggaccacctc
      541 aggataaatg gggcccacag cacttctggc atgatgtgaa gcttaggttt tattataaca
      601 cctcagaaca aaacatgaca gactacgaag gagcagaaat ggtgagcctt cgtttactgt
      661 cattggtgaa agaggaattt ctttttctca gtcccaacct tgattctcaa ggactaaaat
      721 gtgcgtcttc tcctcatgga ctagttatgg ttggagttgc agggactgtc caccgcggaa
      781 attcttgttt gggcatattt gaacaaattt tttttttata tttttcctgt ggtttttttt
      841 tc
//
