LOCUS       XM_039078169            1290 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus polyadenylate-binding protein 1-like
            (LOC100912402), mRNA.
ACCESSION   XM_039078169
VERSION     XM_039078169.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039078169.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1290
                     /gene="LOC100912402"
                     /note="polyadenylate-binding protein 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:100912402"
                     /db_xref="RGD:6487545"
     CDS             232..1080
                     /gene="LOC100912402"
                     /codon_start=1
                     /product="polyadenylate-binding protein 1-like"
                     /protein_id="XP_038934097.1"
                     /db_xref="GeneID:100912402"
                     /db_xref="RGD:6487545"
                     /translation="MNGRIVATKPLYVALAQRKEERQAHLTNQYMKRMASVRAVPNPV
                     INPYQPAPPSGYFMAAIPQTQNDAAYYPPSRIAQLSPHWIAQGARPHPFQNMPGANRP
                     AAPRPPFSTMRPASSQVPRVMLTQGVANTSTQTMGPRPAAAATAATPAVRTVPQYKYA
                     AGVCNPQQHLNAHPQVTMQQPAVHVQGQEPLTASILASAPPQEQKQMLGERLFPLIQA
                     MQPSLTGKVTGMLLEIDNPELLHMLESPESLFSKVNEAVAVLQARQAKEAAQKAVSSA
                     TGVPTV"
ORIGIN      
        1 acttaagcgc aaatttgagc agatgaaaca agacaggatc accagatatc agggtgttaa
       61 cctttatgtg aaaaatcttg atgacggtat tgatgatgag cgtctccgga aagtgttttc
      121 tccatttggt acaatcacta gtgcaaaagt aatgatggag gatgggcgca gcaaaggatt
      181 cggttttata tgtttctcct cccctgaaga agccataaag cagttacgga gatgaatggc
      241 agaattgtgg ccaccaagcc actctatgta gctttagctc agcgcaaaga agagcgccag
      301 gctcacctca ctaaccagta tatgaagagg atggcaagtg tacgagctgt gcccaaccct
      361 gtgatcaacc cctaccagcc agcacctccg tcaggttact tcatggcagc tatcccacag
      421 actcagaacg atgctgcata ctaccctcct agccgaattg ctcaactaag tcctcactgg
      481 attgctcagg gtgccagacc tcatccgttc cagaatatgc ccggtgctaa ccgcccagct
      541 gctcctagac caccatttag tacgatgaga ccagcttcct cacaggttcc ccgagtcatg
      601 ctaacacagg gtgttgctaa cacatcaaca cagacaatgg gtccacgtcc tgcagctgct
      661 gctactgcag ctactcctgc tgtccgcact gttccccagt ataaatatgc tgcgggagtc
      721 tgcaatcccc agcaacatct taatgcacac ccacaagtta ccatgcaaca gcctgcggtt
      781 catgtgcaag gtcaagaacc tttaactgct tccatattgg catctgcacc cccgcaagag
      841 caaaagcaaa tgttgggtga acggctgttt cctcttattc aagccatgca gccttctctt
      901 actggcaaag ttactggcat gctgttggag attgataacc cagaattact tcacatgctt
      961 gagtctccag agtctctctt ctcaaaggtc aatgaagctg tagctgtact acaagcccgc
     1021 caagcgaaag aggctgccca gaaagcagtg agcagtgcca ctggtgtccc aactgtctaa
     1081 attgatcagg gaccatgaac agaaacttgt gcttcaccga agaaaaatat cttaaatatc
     1141 gaaaaattta aatattatga aaaaaacatt gcaaaatgta aaataaatga aaaaaggaaa
     1201 ggaaactttg aaccttatgt accgagcaaa tgccaggtct agcaaacagt gctagtccta
     1261 gattacttga tttaaaacaa caaaaaaaat
//
