LOCUS       NM_001409402            2681 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus interferon alpha-1-like (LOC100912356), mRNA.
ACCESSION   NM_001409402 XM_039111096
VERSION     NM_001409402.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2681)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000162.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001409402.2.
            
            On Jul 17, 2022 this sequence version replaced XM_039111096.1.
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            RefSeq Select criteria           :: based on single protein-coding
                                                transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2681              JACYVU010000162.1  17777119-17779799   c
FEATURES             Location/Qualifiers
     source          1..2681
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q32"
     gene            1..2681
                     /gene="LOC100912356"
                     /gene_synonym="If1ai11; If1ai8"
                     /note="interferon alpha-1-like"
                     /db_xref="GeneID:100912356"
                     /db_xref="RGD:6487214"
     exon            1..2681
                     /gene="LOC100912356"
                     /gene_synonym="If1ai11; If1ai8"
                     /inference="alignment:Splign:2.1.0"
     CDS             323..892
                     /gene="LOC100912356"
                     /gene_synonym="If1ai11; If1ai8"
                     /note="interferon 1ai8; interferon 1ai11"
                     /codon_start=1
                     /product="interferon alpha-1-like precursor"
                     /protein_id="NP_001396331.1"
                     /db_xref="GeneID:100912356"
                     /db_xref="RGD:6487214"
                     /translation="MAKLCAFLVVLVVMSHWSTCCLGCDLPHTHNLRNKRAFTLLAQM
                     KRLSPVSCLKDRQDFGFRLEKVGAQQIQKAQAISILHGLIQHILSLFTSKESSTAWDA
                     TLLDSFCNDLQQQLSGLQACQMQQMGVQEPPLAQEDSLLAVREYFHRITVYLREKKHS
                     PCAWEVVRAEVWRALSSSVHLLSRLREEK"
ORIGIN      
        1 caagacaatg acaagctttt tttttttagg aataaactca gaaacagctt tgttgagagg
       61 cagaatgaaa atgaaagcag tactgaaaaa caaagtgggc aaaaccccct caaaacccaa
      121 aaaacaaaaa gccaggctca tccaaagtat ggcttagaga aagtgaaaag ggcataggaa
      181 agtaataaca agacattcag aaaatagaaa gtagagcttt gtcttattta atacacatcc
      241 acccatgatg gtcttcagag tactagaggg aaggttcagg accacacagc ccagaagaac
      301 agcagaatct acaagatcca caatggctaa gctctgtgct ttcctagtgg tcctggtggt
      361 gatgagccac tggtcaacct gctgtctagg atgtgatctg cctcatactc ataacctcag
      421 gaacaagaga gccttcacac tcctggcaca aatgaagaga ctctcccctg tctcctgcct
      481 gaaggacaga caggactttg gattccgttt ggagaaggtg ggtgcccagc agatccagaa
      541 ggctcaagcc atctctatcc tacatgggct gatccagcat atcctcagcc tcttcacatc
      601 aaaggagtca tctactgctt gggatgcaac cctcctagac tcattctgca atgacctcca
      661 gcagcagctg agtggtctgc aagcctgtca gatgcagcaa atgggggtgc aggaacctcc
      721 cctggcccag gaagactccc tactggctgt gcgggaatac ttccacagga ttaccgtgta
      781 cctgagagag aagaaacaca gcccctgtgc ctgggaggtg gtcagagcag aagtctggag
      841 agccctgtct tcctcagtcc acttgctgtc aagactgaga gaagagaagt gagtcctgag
      901 acaaagtgtg gagaggactc ttctggacta ggacactgta tcacactttg taagagctgc
      961 cttaaagact ctcattactt tcagtatgac tgcaatcaac catctagatg tttcagcaat
     1021 attgaacaat tgtttcaata tgcaaaacca tttttatgtt tgcacccatt tgggtttatt
     1081 tgtttgttta tttatttatt tatttattta tttatttatt tttactgcta gtaatataat
     1141 ttgaggtatt tctatttaat cttgcagcct atatttctta atataacaaa tcatcactta
     1201 taattaattt attttgtatt caaataaatt tactttataa aacactttgg attagttaat
     1261 ttgttatctc attaacatta tcaaatattt ttcacattag agtctacact gtaaatactg
     1321 tacatgaaca ctttctaaat attagagagg atagacatat acactgcaca gaatttagac
     1381 aaaccctaaa tatttttcat cttcttttct ctagcatata gtattcttct ggctggatag
     1441 acagctgctg tgcagaagac aaccagagag tcttgctcct cacattcctt agtccccttt
     1501 gaccaaatat gtcctgggtt aatttagcat ctggtttccc tgatctcata tacttatcat
     1561 ctactcttat cattaatgag tttaattgtt ttcggttcta aatatgagtg aggtcatgta
     1621 cagcaacaca aaacagataa aaaattacta gcctgcatat atggcataga aaagcaagac
     1681 aagaagaccc tgggaattaa ccccactggt catagcctta taaaccaatc tgggaataaa
     1741 tccaaccagg agagtgaagt gattctaaaa ttaacccttt gaaacaccac tattcctttt
     1801 ctatttcctg gacctttcct cttcccattt tctacttctc ttttctgtga cttgtttctc
     1861 tttctcttct tcttcctcct cctcctcctt gtcatcatca tcgtcgtcat cgtcatcatc
     1921 atcatcacct tcatcctgct ggtacagtac catctcgtgg agcaagggta gtcgctctca
     1981 ggggtacaat ctctgaagat acctgaatct ttttcctcca gcagccatct tttgccacag
     2041 ttcctcagct ggatattgga attgcctcca ctttccaagc tgatattttg tctggcttgt
     2101 catgtccatt cagtcataac cactcacagt tcacatgaga aactacgctg ttgggttcaa
     2161 gaacacggct ttgctgcatc atccactgcc tctggttctt ccaattcgtc tccctcttct
     2221 tcaatggttc ctgaggccag gaaatcagcc cttccttttc tcagtgaaca gttgtgagtc
     2281 tctccattcc ttggcaggga ctgaggaaga gttctgtggt aagcattgga cagtgcagga
     2341 accccctctt agatgtaagc tctaatttca aatcaggcat tttgacagta tgtatacaac
     2401 cgacctcagg gttttctttc taggaaagca gagaagagac acagaacaga attggagact
     2461 tcaaccatcc aaccaacact tcaggagaga tgaaaaagta aatgcaaaaa tacagagagt
     2521 tgaggcactg aaaacccttg ctgctgtaac aattaaatga atacttctgc cattagacac
     2581 attggaaatg gaagactaat cactgaattc gatattcaat atgaattgat ggctgacaaa
     2641 tatatgggca ttagtgtctt agactgaaac tgaaagtgga a
//
