LOCUS       XM_039113352            2207 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus nuclear nucleic acid-binding protein
            C1D-like (LOC100912037), mRNA.
ACCESSION   XM_039113352
VERSION     XM_039113352.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039113352.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2207
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2207
                     /gene="LOC100912037"
                     /note="nuclear nucleic acid-binding protein C1D-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 8 ESTs, 1 long SRA read, 6 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:100912037"
                     /db_xref="RGD:6489562"
     CDS             1055..1666
                     /gene="LOC100912037"
                     /codon_start=1
                     /product="nuclear nucleic acid-binding protein C1D-like"
                     /protein_id="XP_038969280.1"
                     /db_xref="GeneID:100912037"
                     /db_xref="RGD:6489562"
                     /translation="MDLSWRTARLHRDTVGAEEGCYSISVETVIRTHAREAKTVSWRH
                     HCATSFPETGVHGIELVTMAGEEMNEDYPVEIHDSLTALESSLGAVDDMLKTMMSVSR
                     NELLQKLDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVK
                     EITDKKKAAKLDRGAASRFVKNALWEPKPKNTPKVANKGKSKH"
ORIGIN      
        1 ttgtaggggg ctgttgggga ttgttagggt tggtagttag ttgctgttgg ccatggtttg
       61 ttaagtagtc atgtgcaaag gagaaacaac aagaagaaga aattagatat cgtgcttgcc
      121 acaaggaact tgatgcccat aatcagcagg aaatagtgta acaatgtcac cccctttcca
      181 acccttgaca ttatacaaca atcactttcc tttccactct attccttttt tttttttccc
      241 cctatctagc attagggggt taaaagggtg gaaaagagaa gaacccacaa agtagccaaa
      301 gattggctac agggaaatac agaggcacct tagtaacact tgactgcagc agtctggggt
      361 acagcaatta gacatgttaa gacccgtcaa tatgttcata ctctttggtc ttgtcatttc
      421 ttctttcaaa tgctatctct agtaggaata aatttgtgct catgtatgta tatataagca
      481 atcagatgct taatactatt taaatattta gaagtatcct aaatttctaa taacactgaa
      541 aatatgacta ttcaagagaa tattttactg ccttgaataa cagtataaaa actattgcag
      601 aaccaagcag gatggtgcac acctttaatc ccagtgctcc aggggcagag gcaagtgaat
      661 ctcttgagtt cgaggccagt tggtcaaata gagttccaga ctggcatcat gagaccatgc
      721 ctcaaagaca aacaaaaact aatatagcaa tgggaaaaat gctaatgata aattctttta
      781 aaggctataa gagttgggca tgatagcaca tgcccttaat cccagcacta cagaggcaga
      841 gcaaatttca tgagtgttag gccaaacagg gctgcatagt gagaactggt ctcaagaaag
      901 acgtggggtt ggggatttag ctcagcggta gagcacttgc ctagcaagtt caaggccctg
      961 ggtccggtcc ccagcctcaa aaagaaaaag aaaaagaaaa agaaagacgt ggtggcttaa
     1021 gtctttagtc tcagcactca ggaggcaaac gcagatggat ctgagttgga ggacagccag
     1081 actacacaga gacactgtgg gagcagagga aggatgttac agtatatcag tagaaacagt
     1141 tataaggacg catgcgcggg aggcaaaaac cgtgtcatgg cgtcatcatt gcgcgacctc
     1201 ttttccggag acaggcgtcc acggtattga gttggtcaca atggcaggtg aagaaatgaa
     1261 tgaagactat cccgtagaaa ttcacgattc tttgacagct ctggagagct ccctgggggc
     1321 ggtggatgac atgctgaaga ccatgatgtc tgtttctaga aatgagttgt tgcagaagtt
     1381 ggacccactg gaacaagcaa aggtggattt agtttctgca tatacattaa attcaatgtt
     1441 ttgggtttac ttggcaactc aaggagttaa tcccaaggag catccagtga agcaggagtt
     1501 ggaaagaatc cgagtctaca tgaacagagt caaagaaata acagacaaga agaaggctgc
     1561 caagctggac agaggggccg cgtcgagatt tgtcaaaaat gcactctggg aacccaaacc
     1621 aaaaaacaca ccaaaagtgg ctaataaagg gaaaagtaaa cactaataat cttttggttt
     1681 tgatgtacgt gttttcaaaa agtacatcat ttttatcagt ttacagtgta cttatgtgac
     1741 catgtggtgt ttaaatggat tcctttttga attcatgtat aaatttacac attaaatttt
     1801 gtgatactga atcttttttt ttgctgagaa agattaagtt gtcgttattg attttcatat
     1861 aaagcatcat gatgttttaa tattgaaaga tattctataa gcaattgtga aatccaaatg
     1921 ttctttgtaa acgtttgtag tgttttaaat gtagtgttat gatgaagtgt gctgtctgta
     1981 gactggagtt gttagaggac atctgttttc acaatgatga gaaatgtaat gacttaaata
     2041 cccactctgg tttctgttca gttagttcaa catgtttctg tgaatttttt ttaggagtaa
     2101 ttgctgtctt gatgttcaca gtacaaaatt gaaaccttca ggccgtactt taattcttca
     2161 tgttccattt aaaataaaat attctcattc attaaaaaaa aaaaaaa
//
