LOCUS       XM_008762575            3306 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 844-like
            (LOC100912009), transcript variant X1, mRNA.
ACCESSION   XM_008762575
VERSION     XM_008762575.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008762575.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008762575.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3306
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3306
                     /gene="LOC100912009"
                     /note="zinc finger protein 844-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 11 ESTs, 8 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     104 samples with support for all annotated introns"
                     /db_xref="GeneID:100912009"
                     /db_xref="RGD:6489349"
     CDS             42..1412
                     /gene="LOC100912009"
                     /codon_start=1
                     /product="zinc finger protein 120 isoform X1"
                     /protein_id="XP_008760797.2"
                     /db_xref="GeneID:100912009"
                     /db_xref="RGD:6489349"
                     /translation="MCGLLRVTLRGCCEGNSGKLRTPDMDVLTYDDVHLKFTKEEWSL
                     LDASQKSLYQGVMLETLRNLTDIGYILEDHSTEEYFKTSGRHERDSLPEQFQKVLQAQ
                     TGLSSSAFQTELQSNPETSKHAETGKQMEVVTYDDVHVNFTQEEWTWLDPSQKSLYQH
                     VMLETCRNLTATGYIWKEQTTEEYFKSSRRHGRHERSFTGKQPSDFFQYGKPFAHQSH
                     TKRYEITENGEKSYECNQCGKALSQKCSLKIHKRTHTGEKPYKCKQCVKAFAQIGDLQ
                     KHKRTHTGEKPYKCNQCVKAFAQIGDLQIHKRTHTGEKPYECNQCGKAFGRSFALQTH
                     KRTHTGEKPYECNQCGKGFAQNSHLQTHKRMHTGEKPYECIHCGKAFAQSSHLQKHKR
                     THTGEKPYKCNQCGKAFAVTWSLQEHKQTHTGEKPFECNQCGKSFAGRSNLRAHERTH
                     LRGKAL"
ORIGIN      
        1 cttgcaactt ccttctggta actcagcagg tattagtgta tatgtgcggt ctgttgcgag
       61 tgactcttcg ggggtgctgt gaggggaact caggcaagct caggactcca gacatggatg
      121 tacttaccta tgatgatgtg catttgaaat tcactaagga agagtggtca ttgctggatg
      181 cttctcagaa gagtctctat caaggtgtga tgctggagac ccttaggaat ctcacagata
      241 taggctacat tttggaagat cattctactg aagaatattt taaaacttct ggaagacatg
      301 aaagagactc gcttccagaa caatttcaga aagtgttgca ggctcaaact ggactcagtt
      361 catcagcctt tcagacagaa cttcagtcca accctgagac ttcaaagcat gcagagactg
      421 gaaaacaaat ggaggtagtg acctatgatg atgtgcatgt gaacttcact caggaagagt
      481 ggacatggct ggatccttct cagaagagtc tctaccaaca tgtgatgcta gagacctgta
      541 ggaatcttac tgctacaggc tacatttgga aagaacaaac tactgaagaa tattttaaaa
      601 gttctagaag acatggaagg catgaaagaa gttttactgg aaagcaaccc tctgattttt
      661 ttcaatatgg taaacccttt gcacaccaga gtcataccaa aaggtatgaa ataacagaaa
      721 atggagagaa atcctatgaa tgtaaccaat gtggaaaagc tttatcacaa aaatgtagtc
      781 tcaaaataca taaaagaaca catacaggag aaaaacccta taaatgtaag caatgtgtta
      841 aagcctttgc acaaattggt gatctccaaa aacataaaag aacacataca ggagagaaac
      901 cctataaatg taatcaatgt gttaaagcct ttgcacaaat tggtgatctc caaatacata
      961 aaagaacaca tacaggagag aaaccttatg aatgtaacca atgtggtaaa gcctttggac
     1021 gaagctttgc tctccaaaca cataaaagaa cacatacagg agagaaaccc tatgaatgta
     1081 accaatgtgg taaaggcttt gcacaaaata gtcatctgca aacccataaa agaatgcaca
     1141 caggagagaa accctatgaa tgtatccatt gtggtaaagc ctttgcacaa agcagtcatc
     1201 tccaaaagca taaaagaacg cacacaggag agaaacccta taaatgcaat caatgtggta
     1261 aagcctttgc agtcacatgg tctcttcaag aacataaaca aacacataca ggagagaaac
     1321 cttttgaatg taaccagtgt ggtaaatcct ttgcaggaag gagtaatctc cgagcacacg
     1381 aaagaacaca cttaagagga aaagccctgt gaatgtaacc agtgtggtta aactttttaa
     1441 aaaatcagtg gtcttcgcat gcataacaga gcatatatgc tcttacacct gtcttgctct
     1501 ttgctctctt ttattctctg ctcttctcct ttgtccctac tctccccacc cctttcctcc
     1561 acctttcatg gctggccttt tttcctcctc tcttttactc ttcttctttc attaaacctc
     1621 ttcacctgga aaaaaacata tagttaaggg aaacctttga ctggacccag tgcgtgaaag
     1681 ctttttcaca aagcagagat ctccaaaata atacaagacg gaaactgtga aatgtattca
     1741 atgtggtttt aaaacttttt cacaaagaag tggactccaa atacataaac acgttcagtg
     1801 gagaaaccca atgaatgtca tcaatgtact gaagtccttt tccatcacat tcatcttcaa
     1861 atccatgaaa gaacatgtag tgaagagaaa tgctctgact gtaagtaatg tggtaaaacc
     1921 tttgcacaaa acaatcatct cctagcaaat taaataatac acacggcata taaaccctat
     1981 gaatataagc aatatggtaa cccttttgac aattacagta ctcttcaagc aaataaaaga
     2041 agacacaaag taaccctatg tatacaaaca atgggaaaag cctttgtata ttgcaatcat
     2101 cttcaaatac ataacagaag acaaacaggt gaaaaaccct atgaatgtaa gctatatggt
     2161 aaagctttca catgtcagtc agactcaaag gcacaaaata aaccatagtg tagagaaatg
     2221 ttctcagtgt atttaataaa atcctatgag ttcatttaat attgtgaagc cttcagggat
     2281 ttctatagtc tccatcatca tgaaataatc catactgtgg agaaactatg ttaatgcatt
     2341 taagatagag aagacttctc aatcatcaca catcctcatc atcccagagt ggggaaaata
     2401 acctatgaat gcattgaaca tagtgaatca tttgcacatt tctacaatct ttatcatcat
     2461 gaaagtaatc atactgtaaa gatatgtgta taaacaatgt ggtaaagcct ttgtggaatg
     2521 gggtcctcta aaatccagca caacttaggt gaagaaaatg acaggaattt attggaataa
     2581 agctgctcct ggatcattgt cagaaaatga actcaggtcc taaactgtga caagtgagac
     2641 agcctactat tcagtgtgag tcagagtgtg atagagctgc catcccacag tcaaaacctc
     2701 tgacccagaa ttgtctttga aagaacaaaa atggaaaaga gcctcagaaa aaggaggtcc
     2761 aaatatggta ccagctcagg aaggtaccat ggtctgaaac tattattcat gcaatggtat
     2821 gcttacaaac aggggcctat catgcatgcc ttctcagagg cccaactaag cagctaaaag
     2881 agtcagagag agacaattac acccaagcaa tggggagaaa ctggtgattc ctgtggttga
     2941 ataaggaaaa acctggaaga acctgaagac tgatcgtata ggaataccag cagtgacaaa
     3001 tgacctggac acctgggatg tctcagacac tgagcaacca accaggcagc atgcacatga
     3061 tgatatgaga ccccccaaca catacagcag aagacatttg tgtctggact cattcagaga
     3121 agatacacct aaccctcaag agacttaggg ccacagaaag tgggatggtg agatggggac
     3181 atcctcttgg agatggagga ggaggtgtag gatatttaac tctgacaggg tgacctggga
     3241 ggggcataag tcaggactgt gaaaaaagtt taaacaataa ataaaaaaac taagaggaaa
     3301 cagaaa
//
