LOCUS       XM_039096350            2403 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC100911936
            (LOC100911936), transcript variant X2, mRNA.
ACCESSION   XM_039096350
VERSION     XM_039096350.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039096350.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2403
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2403
                     /gene="LOC100911936"
                     /note="uncharacterized LOC100911936; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:100911936"
                     /db_xref="RGD:6489760"
     CDS             220..1227
                     /gene="LOC100911936"
                     /codon_start=1
                     /product="uncharacterized protein LOC100911936"
                     /protein_id="XP_038952278.1"
                     /db_xref="GeneID:100911936"
                     /db_xref="RGD:6489760"
                     /translation="MDFCNANLPPASRQTGSRLSISTIVDSMCCLGQKAEETLGLIGA
                     NRLHDVLTKNNMFNRKKIVGNILGEIRHVPKICSAKSPAGPDNLASALWRRESDPALS
                     MSVASDTHKWQGESSSRCFSPDLDEMLKISWLWKSAQQCYAEEDYNSHKNSEEAESTV
                     SLSGSSEDDLSYLEDIIPDSNSDSQQAGVEVGTKKTNSTIGIRYTSLSAVLFLEDTNC
                     KQIPELQDDTKVTNCIGVSSDVSETDLQFSERIRDTTYSVISAQSRNANYEDDNGITL
                     EESPSLSSKDQFWELPKDPIKKQRRQISQFFYSLFCCLPTPKKRETTSRAEDLAWVCD
                     S"
ORIGIN      
        1 gctgttgctg ctgctgcttc tgctgctgct gctcttgcta tggttttcac accagggtaa
       61 tactggcttt atagaccaag tttggaatga gcttttcttg tctctttgga gaagcagctt
      121 gaagatcatc agtctccact ctaaggccag tagagcgtct cgtggtgatc ccattcccca
      181 cctgttacag tggtggactt ggagaaggaa atcccatgca tggatttctg caatgcaaat
      241 ttaccaccag catccagaca aactggttcc aggctgtcca tatctaccat tgtggattct
      301 atgtgttgtt taggccaaaa ggccgaagaa accctgggac tcataggagc aaataggctt
      361 catgatgtcc tgacaaaaaa taatatgttc aacaggaaaa aaattgttgg gaacatcctt
      421 ggagaaataa ggcatgttcc aaagatttgt tctgccaaga gtcctgcagg tcctgacaac
      481 ctcgcttctg ccctttggag gagagagagt gatcctgcct tgtccatgtc cgtggcatct
      541 gacacccaca aatggcaagg ggagagctcc tctaggtgct tctctccaga tttagacgag
      601 atgctgaaga tcagctggct gtggaagtct gcccaacagt gctatgctga ggaggactac
      661 aacagccaca aaaattctga ggaggcagag agcactgtct cactgagtgg ctcctctgag
      721 gatgacctgt cctacctgga ggatatcatt cccgactcta actcggactc acagcaggct
      781 ggtgtggagg tagggaccaa gaagaccaac agtaccatcg ggatcaggta cacatcccta
      841 agtgctgtat tattccttga agacacaaac tgcaaacaga tcccagaact tcaagatgat
      901 accaaggtta ccaactgcat cggtgtatcc agtgacgtga gtgaaactga cctacagttc
      961 agtgagagaa tacgtgatac tacatactcc gtgatctctg cccagagtag gaacgctaac
     1021 tatgaagatg acaatggcat aaccctagag gagtcaccat ctttatctag caaggaccag
     1081 ttctgggagc tgcccaaaga ccccataaag aagcaaagaa ggcagattag tcagttcttt
     1141 tacagtttat tctgttgcct ccccaccccg aagaaaagag agacaacctc cagggctgaa
     1201 gatcttgcct gggtctgtga ttcttaagcc ctggatttcc gttcagcctg gtatggtcca
     1261 ccagctacag gagggagcca ggccagaaca ggatagagct ttgtaccaca agacctgttg
     1321 ttacctgtca gacacctaca gcctgggcac gagctctcta ccctcctctc cctgcagtgt
     1381 agactattgg ctgcctactt cttaacttac cgtgccccag cactgaggct ggacagagca
     1441 gtcgatcact tgttatgaag agacagctgt ccagatgcag caaacctcgt gagagaattt
     1501 tgtgtttccc atgatagctc atcacctaat tttgatcctt atcaatgacc agatgcaatg
     1561 aactgcatgt actcggtagc ccatgagata tgtctcttca aaagtaagca tgtggcttga
     1621 atctgcaaag acgaccgggg aaactaccct cagctgcatt tgtgggaccg ccatagaaca
     1681 tcatctctca gctccatggg ggagcctgcc ccacaatgac ccggtactgt ggatcctgtg
     1741 gattggtttc tttcgtgatg ttgtcacatc aagactatga acctggagca gtgttatgct
     1801 ctccgtagtt gaaacaagat tcctcaggcc tcacatggaa agtccttcat ttttattaaa
     1861 cgctcacatc attttctttt atactggcct atctcttctc cttgaaagaa aactatgata
     1921 tccagtccca ggtgaataaa aacattgtgg cacatcttct cagtcaagaa cacctaaccc
     1981 tgtgttctat acaccatggc atttacttcc cagaactcat ccacccccaa agttttggca
     2041 atgacaatag gtgcttccct ttgtcgggac acctatatct tattggtggc tggttctaaa
     2101 gcccaaatat tgtcaggtct gcagcacagt tgtcaccata gtttttggct actcttttgg
     2161 gtatttatat caaccaccct tctccacccc aatcccttca accccctccc aacactaggt
     2221 aggtaagaaa gtaggttaga ggagaaagag cccatcagcc tccttagatt tgcttgctgg
     2281 ttagcaatgt cattaagttc cttggggcaa ttccaatctt cattgtcagg acatctccaa
     2341 gtagtgtagc aaaccagcaa acaccaacag caacacagca aacagaacat cagcaattca
     2401 gca
//
