LOCUS       XM_039087857             363 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transcription elongation factor B
            polypeptide 2-like (LOC100911861), mRNA.
ACCESSION   XM_039087857
VERSION     XM_039087857.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039087857.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..363
                     /gene="LOC100911861"
                     /note="transcription elongation factor B polypeptide
                     2-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 6 Proteins, and 92% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:100911861"
                     /db_xref="RGD:6489971"
     CDS             13..363
                     /gene="LOC100911861"
                     /codon_start=1
                     /product="elongin-B-like"
                     /protein_id="XP_038943785.1"
                     /db_xref="GeneID:100911861"
                     /db_xref="RGD:6489971"
                     /translation="MEVFLKIEHRKTSFFTEVKESTTVLELKRIVQGIVNRPPKDQLL
                     FKDDQLLEERKTLRDCGFTSEVAKAQDPAIVTLAFREDAFLLLHASPFSCPLIGGVLK
                     NGLDFERDLEHVMQ"
ORIGIN      
        1 gcagccgcag ggatggaagt gtttctcaag atcgaacaca ggaagaccag cttcttcact
       61 gaggttaagg agtcgaccac agtgttagag ctgaagcgca ttgtccaggg catcgtgaac
      121 aggcctccta aggatcagct gctgttcaag gacgaccagc tccttgaaga gaggaaaact
      181 ctgcgtgact gtggcttcac cagcgaggta gcaaaggcac aggacccagc catcgtgacc
      241 ttggccttca gagaagatgc ctttctactc ctgcatgcca gccctttttc ttgtccacta
      301 attggaggtg tgctgaaaaa tggtctagac ttcgagagag atttggaaca tgttatgcag
      361 tga
//
