LOCUS       XM_039103367            1246 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC100911848
            (LOC100911848), mRNA.
ACCESSION   XM_039103367
VERSION     XM_039103367.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103367.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1246
                     /gene="LOC100911848"
                     /note="uncharacterized LOC100911848; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     and 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 12 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:100911848"
                     /db_xref="RGD:6490713"
     CDS             285..662
                     /gene="LOC100911848"
                     /codon_start=1
                     /product="nidogen-2-like"
                     /protein_id="XP_038959295.1"
                     /db_xref="GeneID:100911848"
                     /db_xref="RGD:6490713"
                     /translation="MSMSWDPTARRQHRLSLLLVLVLLSRAGALRPVELFPYGELWGD
                     RLPREGNVESSPAVKLAVPLCFYCDQFSNLYVGTNGIISTRTYPLPPYPLLPGHLGAS
                     GCLGGGQAWGCVVWRGKQGVPCS"
ORIGIN      
        1 agctcaagag tagttgggac agcccagacc agatccggcc aacagtctca ccttcccagg
       61 ctggctgctc caccaaacta cagcagtctt aggaaaccta atgagaacca gttgtagtga
      121 cctctggcat actttctcag agtcgctgat tggtcagtgg ctgagagctg tagccaatca
      181 gcgcggtgtt tgggcccaca ttgcggacca aaggtccgag tgggcatctg gcgggcacag
      241 tggcctgcag agactcgagg tgtggagggc agagccaggg aggaatgagc atgtcttggg
      301 accccacagc caggcgccaa caccgcctat cgctgctcct ggtgctggtg ctgctgtcac
      361 gagccggggc tctgcgtcct gtggagctct ttccttacgg ggagttgtgg ggagatcggc
      421 tgccacggga gggcaacgtg gaaagctccc cagctgtgaa gctagcagta cctctatgct
      481 tctactgtga ccagttcagc aacctctacg tgggcaccaa tggcatcatc tccaccagga
      541 cttacccact tcctccatac ccacttcttc ctggccacct gggagcaagt gggtgcctag
      601 gaggaggaca ggcttggggc tgcgtggtct ggagaggtaa gcaaggggta ccctgcagct
      661 gaataaacag aagggttggg cttgaacagg aaactacgat attggccaag aggcattccc
      721 ttgattctgc tcctcaacac taagtaaatc gcttagtaaa atgagggact aaggtgcaga
      781 taccaaagac cctgagggaa cttaaggcac tttacaggtt tttttttttt cttttttctg
      841 gaatcaccta taagtacaca aatatttcta atcatatatt caccaaaaaa attaaaaatt
      901 tgggaaattt aaaaaggaac aacttttttt ttgttgttgt atgagctggg tgtggtgtca
      961 ctcaccttca atcccagcag agtcagagag gcaaacagat ctctgtgagt tctaggcgag
     1021 cctggtctac caagtgagtt ccaggacaaa atacagagaa accctgtctg gagaaaccaa
     1081 aaataacccg taggttcgtg tgtacatttc ttgttatttc tttaatattg ttgccgttga
     1141 caacagtggg tccacagtgc ccatattact gtttcacttg ctagttctgc tatttagtat
     1201 gctctggtca gtgtatttct gtaacattta ttacaaccgt ataaaa
//
