LOCUS       XM_039100978            2260 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC100911574
            (LOC100911574), partial mRNA.
ACCESSION   XM_039100978
VERSION     XM_039100978.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100978.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..2260
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            <1..2260
                     /gene="LOC100911574"
                     /note="uncharacterized LOC100911574; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 1 Protein, and 34% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:100911574"
                     /db_xref="RGD:6491878"
     CDS             <1..1608
                     /gene="LOC100911574"
                     /codon_start=1
                     /product="basic proline-rich protein-like"
                     /protein_id="XP_038956906.1"
                     /db_xref="GeneID:100911574"
                     /db_xref="RGD:6491878"
                     /translation="PPLPPPAPLPPPAPLPPPAPLPPPAPLPPPAPPPPLPPPAPLPP
                     PAPLPPPAPPPPLPPPAPLPPPAPLPPPAPLPPPAPLPPPAPLPPPAPLPPPAPLPPP
                     APLPPPPPPLPPPPPPLPPPAPPLPPPAPPPPPAPLPPPAPLPPPAPLPPAPLPPPPL
                     PPPLPLPPPAPLPPPPPLPPPAPPLPPPAPLPPPPLPLPPPAPPPPPPLPPPAPLPPP
                     APLPPAPLPPPAPLPPPAPLPPPAPLPPPAPLPPPAPLPPPPPPLPPPPAPLPPPAPL
                     PPPAPLPPPAPLPPPAPLPPPAPLPPPAPLPPPPPLPPPAPPPPPLPPPAPPLPPPAP
                     PPPPAPLPPPAPLPPPAPLPPAPLPPPPPLPPPLPLPPPAPLPPPPPPLPPPAPPLPP
                     PAPLPPPPLPLPPPAPPPPPPLPPPAPLPPPAPLPPPAPLPPPAPLPPPAPLPPPAPL
                     PPPPPLPPPAPLPPPAPLPPPAPLPPPLPLPPPAPLPPPPPPLPPPAPLPPPPPLPPP
                     PPLPPPAPLWKKKTRNSVAFDNLEEDQ"
ORIGIN      
        1 cctcctcttc ctcctcctgc tcctcttcct cctcctgctc ctcttcctcc tcctgctcct
       61 cttcctcctc ctgctcctct tcctcctcct gctcctcctc ctcctcttcc tcctcctgct
      121 cctcttcctc ctcctgctcc tcttcctcct cctgctcctc ctcctcctct tcctcctcct
      181 gctcctcttc ctcctcctgc tcctcttcct cctcctgctc ctcttcctcc tcctgctcct
      241 cttcctcctc ctgctcctct tcctcctcct gctcctcttc ctcctcctgc tcctcttcct
      301 cctcctgctc ctcttcctcc tcctcctcct cctcttcctc ctcctcctcc tcctcttcct
      361 cctcctgctc ctcctcttcc ccctcctgct cctcctcctc ctcctgctcc tcttcctcct
      421 cctgctcctc ttcctcctcc tgctcctctt cctcctgctc ctcttcctcc tcctcctctt
      481 cctcctcctc ttcctcttcc tcctcctgct cctcttcctc ctcctcctcc tcttcctcct
      541 cctgctcctc ctcttccccc tcctgctcct cttcctcctc ctcctcttcc tcttccccct
      601 cctgctcctc ctcctccccc tcctcttcct cctcctgctc ctcttcctcc tcctgctcct
      661 cttcctcctg ctcctcttcc tcctcctgct cctcttcctc ctcctgctcc tcttcctcct
      721 cctgctcctc ttcctcctcc tgctcctctt cctcctcctg ctcctcttcc tcctcctcct
      781 cctcctcttc ctcctcctcc tgctcctctt cctcctcctg ctcctcttcc tcctcctgct
      841 cctcttcctc ctcctgctcc tcttcctcct cctgctcctc ttcctcctcc tgctcctctt
      901 cctcctcctg ctcctcttcc tcctcctcct cctcttcctc ctcctgctcc tcctcctcct
      961 cctcttcctc ctcctgctcc tcctcttccc cctcctgctc ctcctcctcc tcctgctcct
     1021 cttcctcctc ctgctcctct tcctcctcct gctcctcttc ctcctgctcc tcttcctcct
     1081 cctcctcctc ttcctcctcc tcttcctctt cctcctcctg ctcctcttcc tcctcctcct
     1141 cctcctcttc ctcctcctgc tcctcctctt ccccctcctg ctcctcttcc tcctcctcct
     1201 cttcctcttc cccctcctgc tcctcctcct ccccctcctc ttcctcctcc tgctcctctt
     1261 cctcctcctg ctcctcttcc tcctcctgct cctcttcctc ctcctgctcc tcttcctcct
     1321 cctgctcctc ttcctcctcc tgctcctctt cctcctcctc ctcctcttcc ccctcctgct
     1381 cctcttcctc ctcctgctcc tcttcctcct cctgctcctc ttcctcctcc tcttcctctt
     1441 cctcctcctg ctcctcttcc tcctcctcct cctcctcttc ctcctcctgc tcctcttcct
     1501 cctcctcctc ctcttcctcc tcctcctcct cttcctcctc ctgctcctct ttggaaaaaa
     1561 aaaaccagga attccgtggc ttttgataat ctagaagagg accagtgatg gactgaccat
     1621 gggcattgaa gaatactgca ggttgtttca ttggaagctg tcatagtgac acacattttc
     1681 aaatctgacc tcacatcagt gatctgcctg gtgcctgccc cctggtgtaa gtcaagtgga
     1741 cttcctaaac cttcattttc tcactagact ccagcttctt cattagagac tctcagatcc
     1801 tttggaaccg aggaatggaa ctaacatgcg acagtctgtc aactgaaagt ttcatgagtt
     1861 cgctcctttg ccaagatctt ggcgaacagt cccttaccgt gtgattgtgg ctcagaaatt
     1921 atttttcttt tggtgatgat cgtgctgggc tggatacttt ttgttggcct tgcgtcctac
     1981 atgggcacat ttccagaggc gatgcctcca actctaaagt ggaaagagag gctgtctgtt
     2041 cgggagaaca aggcacgacg aagggctcaa gctttggagg aggagctgct gctctgagtg
     2101 agtcaggaac gatgtggaag ggatataaat atcccccagg agggacccct ctggaagtaa
     2161 acaaagatga ccctggtgaa cccatgcagc tgtgaagatc gcccaactgc acagttcctg
     2221 ttgtaggttt cgcataaagt aatcgcacgt tatcttgtca
//
