LOCUS       XM_039101237            6295 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus deleted in malignant brain tumors 1
            protein-like (LOC100911413), mRNA.
ACCESSION   XM_039101237
VERSION     XM_039101237.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6295
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6295
                     /gene="LOC100911413"
                     /note="deleted in malignant brain tumors 1 protein-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 17 ESTs, 1 Protein, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 1 sample with support for all annotated introns"
                     /db_xref="GeneID:100911413"
                     /db_xref="RGD:6493252"
     CDS             23..5908
                     /gene="LOC100911413"
                     /codon_start=1
                     /product="deleted in malignant brain tumors 1
                     protein-like"
                     /protein_id="XP_038957165.1"
                     /db_xref="GeneID:100911413"
                     /db_xref="RGD:6493252"
                     /translation="MGISIVIFEICLLWGQILSTGQWNPRGTNNDVVYVTEETTEALQ
                     SSSPTPGWWNPGGTPNVTSSTQVPNSTSIGTDSVLAVRLVNGGDRCRGRVEILYQGSW
                     GTVCDDSWDINDANVVCRQLGCGGALSAPGSAQFGQGSGSIVLDEVACTGNETYLWNC
                     SHRGWLSHNCDHQEDAGVICSGTDSVLAVRLVDGGDSCRGRVEILYQGSWGTVCDDSW
                     DIHDANVVCRQLGCGGALSAPGSAQFGQGSGSIVLDDVACTGHEVYLWNCSHRGWLSH
                     NCGHQEDAGVICSSSQTSSPIPDVSYRTELPTDGTDSVLAVRLVDGGDSCRGRVEILY
                     QGSWGTVCDDSWDINDANVVCRQLGCGGALSAPGSDQFGQGSGSIVLDEVSCTGHEAY
                     LWNCSHQGWLSHNCGHQEDAGVVCSASQTSSPTPGLWNPRGTHNDVVYVTEETTEASQ
                     TSSPTPGLWNPRGTHNDVVYVTEETTEDSQTSSPTPGWWNPGGTPNVTSSTQVPDSTS
                     IGTDSVLAVRLVNGGDRCRGRVEIFYQGSWGTVCDDSWDINDANVVCRQLGCGGALSA
                     PGSDQFGQGSGSIVLDEVACTGNETYLWNCSHRGWLSHNCDHQEDAGVICSGTDSVLA
                     VRLVNGGNSCRGRVEILYQGSWGTVCDDSWDINDANVVCRQLGCGGALSAPGSDQFGQ
                     GSGSIVLDEVACTGNETYLWNCSHRGWLSHNCDHQEDAGVICSGTDSGLAVRLVNGGD
                     TCRGRVEILYQGSWGTVCDDSWDINDANVVCRQLGCGGALSAPGSDQFGQGSGSIVLD
                     EVSCTGHEAYLWNCTHRGWLSHNCGHQEDAGVICSASQTSSPTPDVSYRTELPTDGTD
                     SVLAVRLVNGGDRCRGRVEILYQGSWGTVCDDSWDINDAKVVCRQLGCGGALSAPGSD
                     QFGQGSGSIVLDEVACTGHEAYLWNCTHRGWLSHNCGHHEDAGVICSASQTSSPTPGT
                     DSGLAVRLVNGGDRCQGRVEILYQGSWGTVCDDSWDINDANVVCRQLGCGRALSAPEN
                     AKFGQGSGSIVLDDMACSGNEAYLWSCSHQGWLSHNCGHQEDAGVVCSASQSRSPTPG
                     WWNPAGTSRDVSYRTELPTDASQTSSPTPDVSYRNEQMTEASQSSRPTPDVSYRTEQT
                     TDGSWIPGSPNSVEPLRDVSYRTEQTTEASQTSSPTPHVSYRNEQTTEDVSYRNEQTT
                     EASQTSSPTPGWWNPGGTNNDVSYGPEQTTDNAQTQSTTWPDMWPTTTPETTTDWWTT
                     KYSSSEYICGGLLTLPSGQFSSPYYPGSYPNNARCLWKIFVSSMNRVTVVFTDVQLEG
                     GCNFDYILVFDGPEYNSSLIARVCDGSNGSFTSTQNFMSVVFITNGSVTRRGFQADYY
                     STPISTSTRNDSSLVLRLVNGTNRCEGRVEILYRGSWGTVCDNSWDINDANVVCRQLG
                     CGSALSAPGNAWFGQGSGLIVLDDVSCSGYESHLWNCRHPGWLVHNCRHVEDAGVICS
                     LPDPTPSPGPVNYTCGGFLTGFSGQFSSPFYPGSYPNNARCLWNIEVPNNYRVTVVIR
                     DVQLEGGCNYDYIEIFDGPHHSSPLIARVCDEAMGSFTSTSNFMSVRFITNHSVTRRG
                     FRADYYSDFDNNTTNLLCLSNHMRASVSRSYLQSMGYSARDLVIPDWNVSYQCQPQIT
                     QREVIFTIPYTGCGTTKQADNETINYSNFLKAAVSNGIIERRKDLHIHVSCKMLQNTW
                     VNTMYITNNTVEIQEVQYGNFDVNISFYTSSSFLYPVTSSPYYVDLDQNLYLQAEVLH
                     SDTSLALFVDTCVASPHPNGFSSLTYDLIRSGCIRDETYQSYSSPSPRITRFKFSSFH
                     FLNRFPSVYLQCKLVVCRAYDVSSRCYRGCVVRSKRDVGSYQEKVDVVLGPIQLQSPS
                     KEKRSLDLAVADVEKPANSQEVYPTAAIFGGVFLALVVAVAAFTLGRKTRTARGQPPS
                     TKM"
ORIGIN      
        1 caaatcgaga ggaaccagca caatggggat ctccatcgtt atctttgaaa tatgtctttt
       61 gtggggtcaa attctttcta caggtcagtg gaaccccagg ggcacaaata atgatgtggt
      121 ctacgtaact gaagaaacca cagaagctct tcaatcaagc agtcccacac ctggttggtg
      181 gaaccccggg ggcacaccta acgtgacgtc gtctacccaa gttcctaatt ccacatcaat
      241 aggaacagat tctgttttgg ctgtgaggct ggtgaatgga ggagacaggt gtcggggtcg
      301 cgtggagatc ctttaccagg gttcctgggg caccgtgtgt gatgacagct gggacatcaa
      361 tgacgccaat gtggtgtgca ggcagctggg ctgtggcggg gccttgtctg ccccaggaag
      421 tgcccagttt ggacagggct ctgggtccat tgttctggat gaggtggcct gtacaggaaa
      481 tgagacctat ctgtggaact gctctcaccg aggctggctc tctcataact gtgaccacca
      541 ggaggatgct ggagtcatct gttcaggaac agattctgtt ttggctgtga ggctggtgga
      601 cggaggagac agttgtcggg gtcgcgtgga gatcctttac cagggttcct ggggcaccgt
      661 gtgtgacgac agctgggaca tccatgacgc caacgtggtg tgcaggcagc tgggctgtgg
      721 tggggccttg tctgccccag gaagtgccca gtttggacag ggctctgggt ccattgttct
      781 ggatgatgtg gcctgtacag gacatgaggt ctatctgtgg aactgctccc atcgaggctg
      841 gctctctcat aactgtggcc accaggagga tgctggagtc atctgttcat cttctcaaac
      901 aagcagtccc ataccggatg tgtcctatag aactgaactg cccacagacg gaacagattc
      961 tgttttggct gtgaggctgg tggacggagg agacagttgt cggggtcgcg tggagatcct
     1021 ttaccagggt tcctggggca ctgtgtgtga cgacagctgg gacatcaatg acgccaacgt
     1081 ggtgtgcagg cagctgggct gtggcggggc cttgtctgcc ccaggaagtg accagtttgg
     1141 acagggctct gggtccattg ttctggatga ggtttcctgt acaggacatg aggcctatct
     1201 gtggaactgc tcccaccaag gctggctctc tcataactgt ggccaccagg aggatgctgg
     1261 agtcgtctgt tcagcttctc aaacaagcag tcccacaccc ggtttgtgga acccccgggg
     1321 cacacataat gatgtggtct acgtaactga agaaaccaca gaagcttctc aaacaagcag
     1381 tcccacaccg ggtttgtgga acccccgggg cacacataat gatgtggtct acgtaactga
     1441 agaaaccaca gaagattctc aaacaagcag tcccacacct ggttggtgga accccggggg
     1501 cacacctaat gtgacgtcgt ctacccaagt tcctgattcc acatcaatag gaacagattc
     1561 tgttttggct gtgaggctgg tgaatggagg agacaggtgt cggggtcgcg tggagatctt
     1621 ttaccagggt tcctggggca ccgtgtgtga cgatagctgg gacatcaatg acgccaatgt
     1681 ggtgtgcagg cagctgggct gtggcggggc cttgtctgcc ccaggaagtg accagtttgg
     1741 acagggctct gggtccattg ttctggatga ggtggcctgt acaggaaatg agacctatct
     1801 gtggaactgc tctcaccgag gctggctctc tcataactgt gaccaccagg aggatgctgg
     1861 agtcatctgt tcaggaacag attctgtttt ggctgtgagg ctggtgaatg gaggaaacag
     1921 ttgtcggggt cgcgtggaga tcctttacca gggttcctgg ggcactgtgt gtgacgatag
     1981 ctgggacatc aatgacgcca atgtggtgtg caggcagctg ggctgtggcg gggccttgtc
     2041 tgccccagga agtgaccagt ttggacaggg ctctgggtcc attgttctgg atgaggtggc
     2101 ctgtacagga aatgagacct atctgtggaa ctgctctcac cgaggctggc tctctcataa
     2161 ctgtgaccac caggaggatg ctggagtcat ctgttcagga acagattctg gtttggctgt
     2221 gaggctggtg aatggaggag acacgtgtcg gggtcgcgtg gagatccttt accagggttc
     2281 ctggggcact gtgtgtgacg acagctggga catcaatgat gccaacgtgg tgtgcaggca
     2341 gctgggctgt ggcggggcct tgtctgcccc aggaagtgac cagtttggac agggctctgg
     2401 gtccattgtt ctggatgagg tttcctgtac aggacatgag gcctatctgt ggaactgcac
     2461 ccaccgaggc tggctctctc ataactgtgg ccaccaggag gatgctggag tcatctgttc
     2521 agcttctcaa acaagcagtc ccacaccgga tgtgtcctat agaactgaac tgcccacaga
     2581 cggaacagat tctgttttgg ctgtgaggct tgtgaacgga ggagacaggt gtcggggtcg
     2641 cgtggagatc ctttaccagg gttcctgggg cactgtgtgt gacgacagct gggacatcaa
     2701 tgatgccaag gtggtgtgca ggcagctggg ctgtggcggg gccttgtctg ccccaggaag
     2761 tgaccagttt ggacagggct ctgggtccat tgttttggat gaggtggcct gtacaggaca
     2821 tgaggcctat ctgtggaact gcacacaccg aggctggctc tctcataact gtggccacca
     2881 tgaggatgct ggagtcatct gttcagcttc tcaaacaagc agtcccacac cggggacaga
     2941 ttctggtttg gctgtgaggc tggtgaatgg aggagacagg tgtcagggtc gcgtggagat
     3001 cctttaccag ggttcgtggg gcacagtgtg tgatgacagc tgggacatca atgacgccaa
     3061 tgtggtgtgc aggcagctgg gctgcggcag ggccttgtct gccccagaaa atgccaagtt
     3121 tggacagggc tctggatcca ttgttctgga tgacatggcc tgttcaggaa atgaggccta
     3181 tctgtggagc tgctcccacc aaggctggct ctctcataac tgtggccacc aggaggatgc
     3241 tggagtcgta tgttcagctt ctcaatcaag aagtcccaca cccggttggt ggaaccctgc
     3301 gggcacaagc agagatgtgt cctatagaac tgaactgccc acagacgctt ctcaaacaag
     3361 cagtcccaca ccagatgtat cctatagaaa tgaacagatg actgaagctt ctcaatcaag
     3421 cagacccaca cctgatgtgt cctatagaac tgaacagacc actgatggtt cgtggattcc
     3481 cggaagccca aatagcgttg aaccattgag agatgtgtcc tatagaactg aacagaccac
     3541 tgaagcttct caaacaagca gtcccacacc tcatgtatcc tatagaaatg aacagaccac
     3601 tgaagatgta tcctatagaa atgaacagac cactgaagct tctcaaacaa gcagtcccac
     3661 acctggttgg tggaaccccg ggggcacaaa taacgatgtg tcctatggac ccgaacagac
     3721 cacagacaat gcccaaaccc agagcacaac ctggccagat atgtggccta ctaccacccc
     3781 agaaactaca acagattggt ggactacaaa atattcttcc tctgaataca tctgtggagg
     3841 tttactgacc ctaccctctg ggcagttttc cagcccatac taccctggga gctatcctaa
     3901 caacgctaga tgtttgtgga aaatttttgt ctccagcatg aaccgtgtga cagtggtctt
     3961 cacagatgtg cagcttgaag gaggttgcaa ctttgactac atcctggttt ttgatggccc
     4021 tgaatacaat tcttctctca ttgctcgggt ttgtgatggg tccaatggat ctttcacctc
     4081 aacccagaac ttcatgtctg tagtgttcat cacaaatggc agtgtcacga ggagagggtt
     4141 ccaagctgac tactactcta ctcctatcag caccagcaca agaaatgatt cttcattggt
     4201 gttgagactg gtaaatggaa caaaccgctg tgagggccga gtggagatct tgtacagagg
     4261 ctcttggggt accgtgtgcg acaacagctg ggacatcaat gatgccaatg tggtctgcag
     4321 acagctcggt tgtggctctg ctctgtctgc tccaggaaat gcttggtttg gtcagggctc
     4381 agggctcatt gtcctggatg atgtgtcttg ctctgggtat gagtctcatc tgtggaattg
     4441 tcgtcaccct ggctggcttg tccataattg tcgccatgtt gaggatgcag gagtcatctg
     4501 ctcactccct gatccgactc cctctcctgg tccagtaaac tatacttgtg gaggtttcct
     4561 gactggattc tctgggcaat tttctagccc attctaccct gggagctatc ctaataatgc
     4621 cagatgtttg tggaacattg aagttccaaa caactaccgc gtgactgtgg tcatcagaga
     4681 tgtgcagctg gaagggggct gcaactatga ctatatagag atttttgatg gcccccacca
     4741 cagttcacct ctcattgccc gggtttgtga tgaggccatg ggctctttca cttcaacatc
     4801 caacttcatg tcagttcgct tcatcactaa tcacagtgtt actcgaagag ggttccgggc
     4861 tgactactac tcagactttg acaataatac caccaatctc ctttgtctgt caaatcacat
     4921 gcgagccagt gtgagcagga gctatcttca gtccatgggc tactctgcca gggatcttgt
     4981 cattcctgat tggaacgtga gttaccagtg tcagcctcag ataacacaaa gggaagtcat
     5041 attcacaatt ccctacacag gctgcggtac taccaaacag gctgacaacg agaccatcaa
     5101 ctactccaac ttcctcaaag cggctgtttc aaatggcatc atcgagagga gaaaggatct
     5161 ccacatccat gtcagctgca agatgcttca gaacacctgg gtcaacacca tgtacatcac
     5221 caacaacaca gttgagatcc aggaagtcca gtatggcaat tttgacgtga atatttcctt
     5281 ttacacatcc tcctccttct tgtatccagt gaccagcagc ccatattatg tggatctgga
     5341 ccagaatttg tatcttcagg ccgaagtcct ccattcggat acctctttgg ctctgtttgt
     5401 ggacacctgt gtggcttcgc cacatcccaa tggcttctcg tctttgacat atgatctcat
     5461 caggagtgga tgcatacgag atgaaactta ccaatcttac tcctcgccct caccacgcat
     5521 cacccgcttt aaattcagtt ctttccactt cctgaaccgc ttcccctcag tgtacctaca
     5581 gtgtaaactg gtggtttgtc gagcatacga tgtctcctca cggtgctaca gaggatgtgt
     5641 agtaaggtcc aagagggatg taggctccta ccaagaaaag gtggatgttg ttctgggacc
     5701 catccagttg caatctccca gcaaagaaaa gaggagtctc gacttggcag tggcggatgt
     5761 ggagaagcca gccaactccc aggaggtcta tcccactgca gccatctttg gtggagtctt
     5821 cctggccctg gttgtagctg tggcagcctt cacactggga aggaagacac gtactgcccg
     5881 tggccaacct ccaagtacta agatgtgaag caaaacaacc cagacattgg ttccacatgc
     5941 atagattccc agaaaagatg gaagtcagga gtgtctaatg cctggcaccc agttacacga
     6001 tgactaggct tcccttagca caaatgtgtg gccgagtatg atgcgatggc aaagaagaaa
     6061 ggtgggggcc aagttttccc aggatctaga ggctgaaggc tgggaagaat gtcataggag
     6121 aatgagatca gtgtctacaa tcacaggcaa ctgtgagcca aacattggca tcagccatcc
     6181 tttctctagc tagaatttcc ctttccccct tttatagctg acttttttga actgtagtgt
     6241 taatacgggc ctttccgtac aacaaactaa gtataaagaa tctttttcaa agtaa
//
