LOCUS       XM_039095041            4851 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC100911353
            (LOC100911353), mRNA.
ACCESSION   XM_039095041
VERSION     XM_039095041.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4851
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4851
                     /gene="LOC100911353"
                     /note="uncharacterized LOC100911353; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:100911353"
                     /db_xref="RGD:6493549"
     CDS             152..4687
                     /gene="LOC100911353"
                     /codon_start=1
                     /product="chromatin structure-remodeling complex protein
                     SYD-like"
                     /protein_id="XP_038950969.1"
                     /db_xref="GeneID:100911353"
                     /db_xref="RGD:6493549"
                     /translation="MQLTGRSPWCVNVDNVSSTSSVKGESGRKIHIKPKKSQNSFRKS
                     GVYVSSRVDPILEVWEENTSATVIPTDDEKYKTDNFYAVSSEHRNSIPKATADREAST
                     STADSLDAAEPDPTNSTNATDCLAALERELTNSNNTADCLADLEPDPTISTNAADFQA
                     AVAPEPTMSTHPADCLPDVEPEPTMSTHPADTLAALEPELTTFNNTADCLADLEPEPN
                     MSTHPADSLPDVEPEPTMSTHPADTLAALEPELTNFNNTADCLADLEPDPTISTNAAD
                     FQAAVAPEPTMSTYPADCLPDVEPEPTMSTHPADTLAALEPELTNFNNTADCLADLEP
                     DPTISTNAADCRAAVAPEPAMSTNPADSMAAVEPEPTMSTHPADILTADEPAHNTSTK
                     AADCLADLEPEPNMSTHPADSLPDVEPEPTMSNHPADTLAALEPESTKSSNAADCLAY
                     VEPEPAMSTHRADSLAALEHELSHANKDADCLASLKAELINSTNATDCLASVGTETTM
                     STQPTDNLAAVEPEHNSTNTADGKDSVEQEPAKPTYRADSLAALEHELTNSNNTADCL
                     ASQKAESIDSTNATDCLASVGTETTMSTHPADNMATDELEPTHSTNAAYFLAALEPQS
                     TNSSNAADILASVGSETTMSTHLADIPIAHEPDYNDSTNAADSLDSVEPEPAMSTHHA
                     DSLAALEHELSHANKAADCLASLKAEPTMSTQPADSSAAVEPEPTISTRAADCLATVL
                     PELTRSNHPADCLDSVQPESSMSTHPADNMATDELEPTNSTNAAYCLAALEPKSTKSS
                     NSADCLAYVEPEPGMSTHRADSLAALEHELSHVNKDADCLASLKAELINSINATDCLA
                     SVGTETTMSTQPTDSLAAVEPEHNSTNAADGLDSVEQEPAKPTHRADSLAALEHELTN
                     SNNTADCLASQKAESIDSTNATDCLASVGTETTMSTHPADNMATDELEPTHSTNAAYC
                     LAALEPESTKSSSAADCLAYVEPEPAMSTHRADSLAALEHELSHANKDAGCLASLKAE
                     LINSTNATDCLASVGTETTMSTQPADSLAAVEPEHNNSTNAADGLDSIEQEPAMPTHR
                     SDSLAALEHELSHANKAADCLASLKAEPTMSTQPADTLASVEPEPTFSTKAADCLATV
                     QPELTRSNHPADCLDSVQPESSMSPHPADSLVAIEPELTNSTKAADFLGAVDPESTKS
                     THPADSMAVDEPELPNSNIAADCLDDLEPDTTISTNAADCQAAVGSETTLSTQPADSL
                     AAVEPEPTNSTKAADCLDSAEPEPTMATHHADILTAVEPEHTNCSSTADCLPAVQPES
                     SMSTHPADSMAAIDAEPTDPAIVADCLAALEPRLSVTCAADSSVLVESHDSGPASHIG
                     LDYVVDLPLYKESTSEEEIFDSATSDEESSFTPDVEEGLPATQGAEDIFHASARAEPI
                     NHSLNLLRESGYLRATEIPRIPFLLFIWLISSLLSIITWMKIQIQQAWHEENGQGAPT
                     KKRVGPENNFHNVTNPV"
ORIGIN      
        1 ttcttctata cttgtaataa tacattcttt gtttttattt tcagaagtat ttgtttttaa
       61 cgatgaaagg cctttgtccc gtcgagtaag atcaccaaga cagctaaaat ccattctgaa
      121 aacatctatc cagcataatt cagaagctgg tatgcaactt acaggaagat caccgtggtg
      181 tgtgaatgtg gataatgtca gctctacctc ctctgtgaag ggagaatcag ggagaaagat
      241 ccacataaaa cctaagaaga gccagaacag ttttagaaaa tctggagttt atgtgtcttc
      301 tcgggtagac ccaattcttg aagtatggga agaaaataca tctgcaacgg taatccccac
      361 tgatgatgaa aaatataaaa cagataattt ctatgctgtg tcttctgagc atagaaattc
      421 tattcctaag gctactgctg atcgtgaagc ttccacctct actgctgaca gcctggatgc
      481 tgccgagcct gacccaacaa attctacaaa tgctactgac tgtctggctg ctcttgagcg
      541 tgagctgact aattccaaca acactgctga ctgtctggct gaccttgagc ctgatccgac
      601 gatttctacc aatgccgctg actttcaggc tgctgttgca ccagagccaa ctatgtccac
      661 ccaccctgct gactgtctgc ctgatgtgga accagagcca actatgtcca cccaccctgc
      721 tgacactctg gctgctcttg agcctgagct gactactttc aacaacactg ctgactgtct
      781 ggctgacctt gagcctgagc caaacatgtc cacccaccct gctgacagtc tgcctgatgt
      841 ggaaccagag ccaactatgt ccacccaccc tgctgacact ctggctgctc ttgagcctga
      901 gctgaccaat ttcaacaaca ctgctgactg tctggctgac cttgagcctg atccgactat
      961 ttctaccaat gccgctgact ttcaggctgc tgttgcacca gagccaacta tgtccaccta
     1021 ccctgctgac tgtctgccag atgtggaacc agagccaact atgtccaccc accctgctga
     1081 cactctggct gctcttgagc ctgagctgac taatttcaac aacactgctg actgtctggc
     1141 tgaccttgag cctgatccga ctatttctac caatgccgct gactgtcggg ctgctgttgc
     1201 accagagccc gctatgtcca ccaaccctgc tgacagtatg gcagctgttg agcctgagcc
     1261 gactatgtcc acccaccctg ctgacattct gactgctgac gagcctgcac ataatacttc
     1321 taccaaagct gctgactgtc tggctgacct tgagcctgag ccaaacatgt ccacccaccc
     1381 tgctgacagt ctgcctgatg tggaaccaga gccaactatg tccaatcacc ctgctgacac
     1441 actggctgct cttgagcctg agtcgactaa atcctccaat gctgctgact gtctggccta
     1501 tgttgagcca gagccagcta tgtccaccca ccgtgccgac agtctggctg ctcttgagca
     1561 tgagctgtct catgccaaca aagatgctga ctgtctggct tctctcaagg ctgagctgat
     1621 taattccacc aatgctactg attgtctggc ttctgttggg actgagacaa ccatgtccac
     1681 ccagcctact gacaatttgg cagctgttga gcctgaacat aattccacca atactgctga
     1741 cggtaaggac tctgttgaac aagagccagc taagcccacc taccgtgccg acagtctggc
     1801 tgctcttgag catgagctga ctaattccaa caacactgct gactgtctgg cttctcagaa
     1861 ggctgagtca attgattcta ccaatgctac tgattgtttg gcttctgttg ggactgagac
     1921 aactatgtcc acccaccctg ctgacaatat ggctactgat gagcttgagc ctacacattc
     1981 caccaatgct gcttactttc tggccgctct tgagccccag tcgactaatt cctccaatgc
     2041 tgctgatatt ctggcttctg ttgggtctga gacaaccatg tctacccacc ttgctgatat
     2101 tcctattgct catgagcctg actataatga ttctaccaat gctgctgaca gtctggactc
     2161 cgttgagcca gagccagcta tgtccaccca ccatgccgac agtctggctg ctcttgagca
     2221 tgagctgtct catgccaaca aagctgctga ctgtctggct tctctcaagg ctgagccaac
     2281 catgtccacc cagcctgctg acagttcggc agctgttgag cctgagccta caatttccac
     2341 cagagctgct gattgtctgg ctactgttct gccagagcta actaggtcaa accaccctgc
     2401 tgactgtctg gactctgttc agcctgagtc atctatgtcc acacaccctg ctgataatat
     2461 ggctactgat gagcttgagc ctacaaattc gaccaacgct gcttactgtc tggctgctct
     2521 tgagcctaag tcgactaaat cctccaattc tgctgactgt ctggcctatg ttgagccaga
     2581 gccaggtatg tccacccacc gtgccgacag tctggctgct cttgagcatg agctgtctca
     2641 tgtcaacaaa gatgctgact gtctggcttc tctcaaggct gagctgatta attccatcaa
     2701 tgctactgat tgtctggctt ctgttgggac tgagacaacc atgtccaccc agcctactga
     2761 cagtttggca gctgttgagc ctgaacataa ttccaccaat gctgctgacg gtctggactc
     2821 tgttgaacaa gagccagcta agcccaccca ccgtgccgac agtctggctg ctcttgagca
     2881 tgagctgact aattccaaca acactgctga ctgtctggct tctcagaagg ctgagtcaat
     2941 tgattctacc aatgctactg attgtttggc ttctgttggg actgagacaa ctatgtccac
     3001 ccaccctgct gacaatatgg ctactgatga gcttgagcct acacattcca ccaatgctgc
     3061 ttactgtctg gctgctcttg agcctgagtc gactaaatcc tccagtgctg ctgactgcct
     3121 ggcctatgtt gagccagagc cagctatgtc cacccaccgt gccgacagtc tggctgctct
     3181 tgagcatgag ctgtctcatg ccaacaaaga tgctggctgt ctggcttctc tcaaggctga
     3241 gctgattaat tccaccaatg ctactgattg tctggcttct gttgggactg agacaaccat
     3301 gtccacccag cctgctgaca gtttggcagc tgttgagcct gaacataata attctaccaa
     3361 tgctgctgac ggtctggact ctattgaaca agagccagct atgcccaccc accgttccga
     3421 cagtctggct gctcttgagc atgagctgtc tcatgccaat aaagctgctg actgtctggc
     3481 ttctctcaag gctgagccaa ccatgtccac ccagcctgct gacactttgg catctgttga
     3541 gcctgagcct actttttcca ccaaagctgc tgattgtctg gctactgttc agcctgagct
     3601 aactaggtca aaccaccctg ctgactgtct ggattctgtt cagcctgagt catctatgtc
     3661 cccacaccct gctgacagtt tggtagctat tgagcctgaa ctgactaatt ccaccaaagc
     3721 tgctgacttt ctgggtgctg ttgatcccga gtcaaccaaa tccacccacc ctgctgacag
     3781 tatggcagtt gatgagcctg agctgcctaa ttccaacatt gctgctgact gtctggacga
     3841 ccttgagcct gatacgacta tttctaccaa tgccgctgac tgtcaggctg ctgttgggtc
     3901 tgagacaacc ctgtccaccc agcctgctga cagtttggca gctgttgagc ctgagccgac
     3961 taattccacc aaagctgctg actgtctgga ctctgctgag ccagagccaa ctatggccac
     4021 ccaccatgct gacattctga ctgctgttga gcctgaacat actaattgct ccagtactgc
     4081 tgactgtctg cctgctgttc agcctgagtc cagtatgtcc acccaccctg ctgacagtat
     4141 ggctgctatt gatgctgagc ctacagatcc tgccattgtt gctgactgtc tggctgctct
     4201 tgaacctcgg ctgtctgtta catgtgctgc tgacagtagt gtgttagttg agagtcatga
     4261 ctcaggacca gctagtcaca ttggattgga ttatgtagtt gatttacctc tttacaagga
     4321 gagtacaagt gaagaagaaa tatttgattc tgctacttca gatgaggaat cttcttttac
     4381 tcctgacgta gaagaaggtc tgcctgctac tcagggtgct gaggatattt ttcatgcttc
     4441 cgcacgagct gaaccaataa accacagctt gaaccttctc agggagagtg gatatcttcg
     4501 ggcaacagag ataccacgca tacctttttt gctcttcata tggcttatat cctcactctt
     4561 atccatcata acatggatga aaatccaaat tcaacaagca tggcatgaag aaaatggcca
     4621 aggagctccc actaagaaga gagtcggacc agaaaataat tttcataatg taacaaatcc
     4681 agtttagaga aatacaactg accagtggct gcggctcctg atccctagac ccttgatgct
     4741 cctccaggat cgattggaat atcaaaacac agtctgtgtg ggagaattga tcatatatat
     4801 aaattttaaa ataaaatgtt cagtctgatt gtagactgaa gtaaaaattg a
//
