LOCUS       XM_039108606             747 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus peptidyl-prolyl cis-trans isomerase
            A-like (LOC100911252), mRNA.
ACCESSION   XM_039108606
VERSION     XM_039108606.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039108606.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..747
                     /gene="LOC100911252"
                     /note="peptidyl-prolyl cis-trans isomerase A-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 ESTs, 131 long SRA reads, 39 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:100911252"
                     /db_xref="RGD:6493676"
     CDS             43..537
                     /gene="LOC100911252"
                     /codon_start=1
                     /product="peptidyl-prolyl cis-trans isomerase A-like"
                     /protein_id="XP_038964534.1"
                     /db_xref="GeneID:100911252"
                     /db_xref="RGD:6493676"
                     /translation="MVNPTVFFDITADGEPLGRVCFELFADEVPKTAENFRALSTGEK
                     GFGYKGSSFHRIIPGFMCQGGDFTCHNGTGGKSIYGEKFEDENFILKHTGPGILSMAN
                     AGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMSIVEAMERFGSRNGKTSKKITISD
                     CGQL"
ORIGIN      
        1 ctttgcagac gacgctgtct cttttcgccg cttgctgcag acatggtcaa ccccaccgtg
       61 ttcttcgaca tcacggctga tggcgagccc ttgggtcgcg tctgcttcga gctgtttgca
      121 gacgaagttc caaagacagc agaaaacttt cgtgctctga gcactgggga gaaagggttt
      181 ggctataagg gctcctcctt tcacagaatt attccaggat tcatgtgtca gggtggtgac
      241 ttcacatgcc ataatggcac tggtggcaag tccatctacg gagagaaatt tgaggatgag
      301 aacttcatcc tgaagcatac aggtcctggc atcttgtcca tggcaaatgc tggaccaaac
      361 acaaatggtt cccagttttt tatctgcact gccaagactg agtggctgga tggcaagcat
      421 gtggtctttg ggaaggtgaa agaaggcatg agcattgtgg aagccatgga gcgttttggg
      481 tccaggaatg gcaagaccag caagaagatc accatctccg actgtggaca actctaattt
      541 ctttgacttg cgggcatttt acccatcaaa ccattccttc tgtagctcag gagagcaccc
      601 ccaccccatc tgctcgcaat accctgtaat ctctgctctc actgaagttc tttgggttcc
      661 atattttcct cattcccctt caagtctagc aggattgcaa agttaagttt atgattatga
      721 ataaaaacta aatgagaaaa aaaaaaa
//
