LOCUS       XM_039095152            5383 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus sperm motility kinase-like
            (LOC100911229), transcript variant X1, mRNA.
ACCESSION   XM_039095152
VERSION     XM_039095152.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039095152.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5383
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5383
                     /gene="LOC100911229"
                     /note="sperm motility kinase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:100911229"
                     /db_xref="RGD:6494469"
     CDS             1408..3372
                     /gene="LOC100911229"
                     /codon_start=1
                     /product="sperm motility kinase-like"
                     /protein_id="XP_038951080.1"
                     /db_xref="GeneID:100911229"
                     /db_xref="RGD:6494469"
                     /translation="MKRWQVCQDLRSSPFQEDALTDHYRILASLGQGGFGEVKLASHL
                     LTQTKVAIKVLPKSNKNLLLKSEIEIMKSLDHPHIIKLLHIIDTNENIFIVLEHAVGG
                     ELLTRIEDFGYLPEEECNRLFRQMVLALQYCHQRGIIHRDIKPENILLDHKGNVKLSD
                     FGLSTKIVMGQKLTTLCGTLPYCAPELFNLNGYDGQAIDVWSLGVVLYYMATGCLPFQ
                     GFTYQAIKQKILSGRYSVNFRLSPDLWDVIAKLLTVNPRERPRVHEILRFNWLKNENE
                     VSPSSLGGNTDSHPDPTILVMMGDMGYEQGQIRESLRERKFDQVMATYLMLREKACSE
                     DKSIKTPHPTQCAQTLKSTGSTTEKQTTLRRGSSLPTLTTFYLPSKLESLNKEKRTTM
                     RHTMPPNLNCFNKSESLNKGRRTIVSHTISPTLNCFNKPESLNKGKRTIVRHTMPPKK
                     TSPVRRICPRLHKSFGMGSASEDSSKRNSSDPSLTIFSSQSFMSAFKYGSTYSKRKAF
                     LQCILHYHASQEEDQYKTTIIPSGKLNTTVPPNSLQEDQPTGHLHNVLTAGAVDNRNL
                     QEKSPPFSTTATKGEGPAIKERESIPSSPRAPREQFRGRSQTPPRAPFRRRVWKTLKS
                     GFLKGLGSLCCCLPIQKKVHPASNRVPPMK"
ORIGIN      
        1 atatatatca aacatactgt tttcaactta ccaatctcca gaagtacaag acttcaaata
       61 atttgttgat aaatttccca gtctaaggca atttgttgta gatcaggatg agatttgaca
      121 tttgaaaact gtctgcctcc catgcctaca gcttttgctg tctgtaggat tctaggctga
      181 ccttctttct tgatcatcct gtagatggct gccctctgtc tcctggagtt ctctgtctct
      241 ggtgagaaat ctaataagag gttttgggta ggctataaca aaactccatt catcacagtc
      301 ccacatactt tagaaacttg tcctagggta tttgagaaag ggtattttgt gacagacgga
      361 caatgacagg ggcatacttt ggacaccaag tatagccaaa ggaatgacta cttgaacatt
      421 gatgtgtaac agccagttgt tagcacagta tttttggtgc tattgacaaa ggacattgga
      481 gcatcctcta ggttcccttg cttactggta aatattagag tctataccca gtgaagctta
      541 aagctttggg gcctgtatta tcattatcca tattgctgtt tctatatcct ctaaagtgga
      601 ggcagtcttt gctgtggtct gcatttaaaa aaaattgcct ataaaattgt gtctgatcac
      661 gtgatatcta gctggtgata ctgtcatggg aagcttttag gagatgggcc cttggtctag
      721 gaagcagtgt tatgacctgg cattggacat ggattgacca gcagtacagg atgaacagcc
      781 acatgttagc actgtatacc atgctttccg tgttccctaa cgtgtgagcc aaaatgagcc
      841 attacattgc tcctggttag gcacttggta gcagtaactg cagagtagct aatacagtcc
      901 tctgaggcag gagaatgccc atccctcatt ggtccatgtc ttgctctgac ctcacaaaga
      961 accattgtga cagatggcag ccacctgcct atataatgca ctgcccaagg ctggttgctg
     1021 tccttctagt gcagagagcg ggttggtggt gatttgtgaa acttggactt tggtaaaaat
     1081 tttggactcg gatactggtg aacgttttgg actcggattc tggcaaaggt ttggactcgg
     1141 atactggtga acgttttgga ctcggattct ggcaaaggtt tggactcgga tactggtgaa
     1201 ggttttggat tcggattctg gcaaaggttt ggactcggat actggtgaac attttgggct
     1261 tggattctgg caacggtttg gactcggata ctgctgaacg tttttgactc ggattctggc
     1321 aaaggtttgg actcggatac tggtgaattt tggactcgga ttctggttac atttggattt
     1381 cccagttggt gtggacaatc gacgaagatg aagaggtggc aagtgtgtca ggacctcagg
     1441 tccagcccct ttcaggaaga tgccttaaca gatcattaca gaatactagc aagccttggc
     1501 cagggaggat ttggggaggt caaactagct tcccatctcc tcacccagac aaaggtagct
     1561 ataaaagttc tccccaaaag caataaaaac ctcctgctca aatccgaaat tgaaatcatg
     1621 aaatccctcg atcaccccca tatcattaaa cttttacaca taattgacac caacgaaaac
     1681 attttcatcg tcctggagca cgcggtggga ggagagctgc tgaccagaat tgaggacttt
     1741 ggatacttac ccgaggagga gtgcaacaga ctgtttagac agatggtttt agcactccag
     1801 tactgtcacc agagagggat catacatagg gatataaaac cagaaaacat tttattggac
     1861 cacaaaggaa acgtaaaact gagtgatttt ggattgagca ccaagatagt catgggtcag
     1921 aagttaacaa cattgtgtgg gaccctccct tactgtgctc cagaactgtt taatcttaat
     1981 ggatatgatg gccaggcaat cgacgtctgg agcttgggag ttgttctcta ctatatggct
     2041 acagggtgtc tccctttcca gggatttacc tatcaagcaa taaagcagaa aatcttgtca
     2101 ggaaggtact cagtgaactt ccggttgtca ccagacctct gggatgtgat agccaaattg
     2161 ctaactgtca accctagaga aaggccaaga gtccatgaaa ttttaagatt taactggctt
     2221 aagaatgaga atgaagtttc tcccagttca ttaggaggaa acactgacag ccaccctgac
     2281 cccactatac tggtcatgat gggcgacatg gggtacgagc aaggtcaaat aagggaaagc
     2341 ttgagggagc gaaagtttga ccaggtgatg gctacttact taatgctcag ggagaaggca
     2401 tgctcagaag acaaatccat caaaacacct catcccacgc agtgtgctca aactttgaaa
     2461 agcacagggt caaccacgga aaagcagaca actctgagga ggggatctag tctgcctacc
     2521 cttacaacct tctatttacc cagcaaatta gaaagtctta acaaggaaaa aagaactaca
     2581 atgaggcaca ctatgccacc taacttgaac tgcttcaaca aatcagaaag tcttaacaag
     2641 ggaagaagaa ctatagtgag tcacactatt tcacccacct tgaactgctt caacaaacca
     2701 gaaagtctta acaagggaaa aagaactata gtgaggcaca ctatgccacc caagaagaca
     2761 agtccagttc gaagaatctg cccacggctt cacaagtctt tcggcatggg gagtgcctcg
     2821 gaagatagct ctaaaagaaa ttcttcagat ccatcactga caatcttctc ctctcaatca
     2881 ttcatgagtg cattcaaata tggctctacc tattcaaaga ggaaggcgtt cttacagtgt
     2941 atcttacatt atcatgcctc ccaggaagaa gaccaatata agaccaccat cataccgagt
     3001 ggaaagctta acacaactgt tccaccaaac tcccttcagg aggaccagcc cacaggacac
     3061 ctccataatg tgcttacagc tggagcagtg gacaacagga acttacaaga gaaatcacca
     3121 ccattctcta ccacggcgac caagggtgag ggtcctgcta taaaagaaag agagtccatc
     3181 ccatcctccc cacgtgctcc tcgggaacaa ttccgtggca ggagtcagac tccacccagg
     3241 gcccccttta gaaggcgtgt ctggaagacc ttgaagagtg gctttctaaa aggactgggg
     3301 agtttatgtt gctgtctacc gatccaaaag aaggtacacc ccgccagcaa cagagtccca
     3361 cctatgaagt aaaaggagcc atggaggcag tcgtggtaac agagcacttg gaggcacaga
     3421 gctccctgca agataccaga gcacgaagat caatttgctg agcgcacaga caggcacaga
     3481 agagagccag gaagttccca tggttgggtg aaagtcagaa ttcatctaca tcacagtctg
     3541 aaactaatgg acaactcttt ctgtctgctg attaatagtt ggttttcatg atggctgctg
     3601 gttccctaat tgtgcctgcc aactgaggtg cttcatagga cttagaaatg ctgaaaacaa
     3661 agttaccatg gcatgcatgt catcatcaag aacacaagcc ttacaggact ttccaggcat
     3721 ggtgagatca tcagctgccg gtctccagat ggacctgtga gaccttagaa gaaacaatgg
     3781 gcagtggaag cagtgaagga cctcagagtg cctgacctgt atgtgcaaca taactgttgc
     3841 tgaccagatt ggagccagaa acagagcgaa gatggtgcac ggatggtcca tctagcgctc
     3901 ataatggaag gaagagttta cactaacagg aaaaatgtga tgtcgaacac gccactatgc
     3961 acactatggc agggcatctc agatcaggca cggtgaagcc caccatgtgt gtttgagtgg
     4021 agacaagggc aagtctggaa cattggatac ttgaagtctg agcgggagct gcttccgagc
     4081 atgaccatgg ataagcacgt ggggatggag aaacaactaa ggccctctgg tctgatgaca
     4141 ggggacttcc tttgcagggc ttatggtctc ctgccacccc cctcacctga ggaaactcag
     4201 ggaattaaat ggtcagatct gtactcctcc ttactcccat actcacctat gccctgcctt
     4261 tcttattttc aacagcatcg aataagatca aagctgtttt ctctctgatg ccctgtaggg
     4321 atgttgctgt cactgcattt gtcttcgggc atcaagccaa gtgcctttat ggggtgtttg
     4381 ccttatgacc ctgtgcttca gctaccaaag gactcttgat ctcacactca acaagggaca
     4441 gagcctgaga ccagctacat ctgcatggtg cttagggcag cagatcctcc tgaagcccta
     4501 tgcactggat ggaaagtctc tttgatgtaa gaggtccctg atgatgtgca gagaagtagc
     4561 aaaagagaag gaagtcgcat cgtcagccac ctgcactgga agcgtcatgg gaagtaaact
     4621 gtgtcctgct ctcaggaaca cccagcagtt ttccctgact gtttgttgtg caagaagagt
     4681 agatcagtcg tggtggagaa cgtcctcact gggaacagtt cctctctcca ccaggagtca
     4741 tgtgatccgt gtaagctatc agaggactcc tgggaagaca ctcaacaagg gacagagcct
     4801 gagaccagct acatcttcgt ggtgcagagg gcaggagaag ttcctggagc tctacacagt
     4861 ggaagtctcc ttcatggaag aggcccctga gattagcaga aaagtagcac cagagacaca
     4921 agtcgcatca tcagccacct ggaaagggag caacatgaga agtaacatgc gttctgatct
     4981 caggaacacc cagcagtttt ccctgaccgt ttgttgtgca agaagagtag atgagtcagt
     5041 gtggagaact tcctcactgg gaacagttcc tctctccaac aggagtcaag caatcagtgt
     5101 aaggtgcatc gcaagtgccc tccatccacc aactccactc ctgtgtaaat gcggcaagga
     5161 gagtcagttg gtgtcactgg taactcagtc acctaggcac tgacaccact tccccagaaa
     5221 aaagtctcaa tgcaaggtca agacagcaga agtatatgac gacagatatt gtacaggggg
     5281 aggggaaaac ccatttattg ggtccattct aaagcagtgg tatcaaccaa tacctacaga
     5341 aatgaaccat gaagtcggcc cataataaaa acggtcctct gta
//
