LOCUS       XM_006228164            2266 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus vomeronasal type-1 receptor 4-like
            (LOC100911184), mRNA.
ACCESSION   XM_006228164
VERSION     XM_006228164.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006228164.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006228164.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2266
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2266
                     /gene="LOC100911184"
                     /note="vomeronasal type-1 receptor 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins, and 94% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:100911184"
                     /db_xref="RGD:6494866"
     CDS             423..1283
                     /gene="LOC100911184"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 4-like"
                     /protein_id="XP_006228226.1"
                     /db_xref="GeneID:100911184"
                     /db_xref="RGD:6494866"
                     /translation="MDFWNLTIRIIFLSQTTIGILGNFSLMFYYLILYYRQGTLKPTD
                     LILMHIMAANAVILLSSGVPSTMSAFRQKPFLNDFACELLLYIQRFGRSVSIGATCLL
                     SVFRVMKISPRESCLTDHKMRTANYICCSTSLLWVLYLLIHSTFFMYTFIKRNSKNMT
                     KELEFAFCSIVGQDDIILSLYAALVMCPEVLFSALITWSSTSMIVILYRHKQRVQHIH
                     SSHGSSRNSPEFRATQNILALVSAFLAFYTLSSILRGCITFSHNHYLWLVNITPIASL
                     FFPSLHPLFL"
ORIGIN      
        1 ctattgcttt gctttgtgac tagaaaatat attctggaaa acttacctta tatttgctta
       61 tatagggctg tcacatttca ttatttctca cagttcaaca tcacatcaca caaaatggtg
      121 tactttgtat gaaactagat agcttccctt ccataaatat ctgcattgtc cagaactgag
      181 caatctcagt gtaacatata tggaaaataa ctcgtcttgt caaaattttt gggataaatt
      241 tttatatggt gtatgcaggc cttgaacacc ttacgttagg ggatcatttg tttcagtctt
      301 tcagaagctc catggaataa aggcttcctt cttcacccaa ggccacaaac acttgtcata
      361 attcattgga ccagggaatt atcattggca atattctaaa aaaaagtgtg tcaaatcaca
      421 gcatggactt ctggaatctg acaatcagaa tcattttttt gtctcaaact acaattggaa
      481 ttctaggaaa cttctctctt atgttctact acctcatcct ttactacaga caaggcacat
      541 taaaacccac agatttgatt cttatgcaca taatggcagc caatgctgtg atccttctct
      601 cttcaggagt gcccagcaca atgtcagctt tcagacagaa gccattcttg aatgattttg
      661 catgcgagct cctattgtat attcaacgat ttggcaggag tgtgtccatt ggtgccacct
      721 gccttctgag tgttttccgg gtcatgaaaa tcagccccag ggaatcgtgt ttgacagatc
      781 ataaaatgag aacagccaac tacatttgtt gctccacttc tctcctctgg gttttgtatt
      841 tgttgataca ttccactttc tttatgtaca catttatcaa aaggaatagc aaaaatatga
      901 caaaagaact agaatttgca ttctgctcca ttgtagggca agatgatatc attttatcac
      961 tctatgctgc actggtgatg tgccctgaag tgctcttctc tgcgctcatc acttggtcca
     1021 gtacatccat gattgtcatt ctgtaccgac acaagcagag ggttcaacac attcacagtt
     1081 ctcatggttc cagcagaaat tctcctgagt tcagagccac tcaaaatatc ctggccctgg
     1141 tgtctgcctt tttggctttt tatactctct cttcaatctt aagaggctgt attacttttt
     1201 cacataatca ctatttgtgg ctggtgaaca tcactcccat tgcttctctg ttttttccct
     1261 ctttgcaccc tttgttttta taagtcatta ctccattgtg tccagattct gtttggtctc
     1321 gacattaaat aaaaacctct tactattatt ttaaatatat aaacaatatg ttctctgtgt
     1381 atgttcttac tactcatttt ggtcaacatg tgaattgatg cttatgattg ctatcctgtt
     1441 ctttctactt gactgtgtct atgcttgtgc caagttgtct ttatcactac ggctctgtgg
     1501 aaaaatttga ggccaagtat ctgtgttctt tcagctttgt ttttatttct tataattgcc
     1561 tgttatgtat ggtctttcct ggcttcatat taattgttgt agttttcatt tcaacatgta
     1621 tgttatgaca gcagaattat gataggaaat tcattaaaac tataggctaa atgtttggga
     1681 aaaattcctg tgatttaaaa tagatttttt tcctcacaca aaatatctta attctggatt
     1741 ccctgctctc tagtcctttc agttccacct aatcccctgc ctcccatctg gatatattcc
     1801 ctttctgtct ctcattagga aacaatcagg tttctaaagg attgttttaa aaggtaatat
     1861 aaagcaagag ttaacacatt ggtgttggac cagatgaaca aacagaagta aatgagccca
     1921 caagaatgaa taaaaattag agctctgcta cctttgacac tcataaatcc ccacaaaacg
     1981 ctaaactgaa aggtataata tatatgctga ggaactgaag cagacttttg caggccctat
     2041 gcatagtgac tctctgtgaa ttcatataag ctttgatatt tgggttcttt caccccaagt
     2101 ttcatattct ttatacctcc tttccatagg gtttcatgag ccctgagagg aggcatttaa
     2161 aacagacatg ccatttagct ctgaatattc cagggcctca cattctctgc ctaatgtctg
     2221 gctgagtgtc tctgtagttt ttccatctgt tgatggagaa agtgcc
//
