LOCUS       XM_006229628            2290 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus X-linked lymphocyte-regulated protein
            3A-like (LOC100911047), mRNA.
ACCESSION   XM_006229628
VERSION     XM_006229628.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006229628.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006229628.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2290
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2290
                     /gene="LOC100911047"
                     /note="X-linked lymphocyte-regulated protein 3A-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 5 long SRA reads, 6 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:100911047"
                     /db_xref="RGD:6495416"
     CDS             159..842
                     /gene="LOC100911047"
                     /codon_start=1
                     /product="X-linked lymphocyte-regulated protein 3A-like"
                     /protein_id="XP_006229690.1"
                     /db_xref="GeneID:100911047"
                     /db_xref="RGD:6495416"
                     /translation="MSSSERKATASVGRHPSVVPNLSSDDSQNPPGAIAAANKEVPVA
                     GREETIASGTERQQDRKKKQDLFQELEEPIQKVLQENRERFLRIMASSFLAMEVKVKD
                     ILKTQCEQRQKLYQDYSLQVTNLSKKLTTDANQVKKHAEKLCNMFMEQQKFIHESLTL
                     QKNRMEEFKSLCEEYLEKFEVLRDSRANSIAEELRHLIATLEVKLLMMHSQQETAAAP
                     QSLLDMLFS"
ORIGIN      
        1 agccagtgcg catgtgcctg tggcatatca accaatcaga ggtcgttata tctggacgag
       61 gtccagatga aggcagatcg acctgtgtga gtggaagaag gctgtgttgc ggactcgagg
      121 agcctaggag tgctgtctaa cccaagaagc ttctagccat gtcaagcagt gaaaggaagg
      181 ccactgccag tgtcggcagg cacccaagtg tggtcccaaa tctctcttca gatgacagcc
      241 agaacccacc aggtgcaatc gctgcagcca acaaagaagt ccctgttgcc ggtagggagg
      301 aaactattgc ctctggaaca gaaaggcaac aggacaggaa gaaaaaacag gatttgttcc
      361 aagaattaga agagccgatt cagaaagttc tccaggaaaa cagagaaaga ttcttgagga
      421 tcatggcatc atctttcctt gccatggagg tcaaagttaa ggacattcta aaaacccagt
      481 gtgaacagag gcagaaactt tatcaggact attctcttca ggttacaaat ttgagtaaga
      541 agctaaccac ggatgcaaac caagtcaaga agcatgccga aaaactctgc aatatgttta
      601 tggagcaaca gaagtttatt catgaatctc tcactctgca gaagaacaga atggaggaat
      661 ttaagtcact gtgtgaagaa tacttggaga aatttgaggt gctgagggat tctcgggcaa
      721 attccattgc tgaagagctg agacatctca tagccacctt ggaagtaaaa cttctgatga
      781 tgcatagcca gcaagagact gctgctgccc cacagtctct cctggatatg ttattctcgt
      841 aatactttgg aggacaaaag tcaatatgag cggagaagaa ataagctggg taaagctacc
      901 tgtggtgttt gcagttttgg cgactagatc ttccgtgttc tccccctgtt cctgaagatg
      961 cctctttctg ttcaaaccca aatgtaccca aggatttgtg tggcagcagt acaaatacgt
     1021 ctgtaggaag ctccaacccc ggggtagaaa caacaggcct tccctgttag catcgtaatt
     1081 aagggttggc actcgttggc attgatatag cgcattatca tacgtgagca tcattttccc
     1141 aaactagaag gcacacaagt gggccatcct tgtcttgtcc agataaacaa ttaaagaaga
     1201 tgcagtctgt tttttacact ctgctcttaa atgtgttcag tgatgcagcc tatgggacgg
     1261 accttaagcc tccaaaggta gtgtgctgtt aaaaagtaaa ttagtagggt tggggtttta
     1321 gctcagtggt agagcacttg cctagcaagc gcaaggccct gggttcagtc ctcaggtccc
     1381 cccccccaaa aaaaagtaaa ttagtagaat tcatcacacc tcccgagatt gatgtgagta
     1441 acgtggtgtg catctgtaga aatgttattt gaagacaaca tttatgaggt cttccagtta
     1501 aatgtgtctc tgtcccatta agaggtgatt cttaactcga atagagcttg actcgccgtg
     1561 gtttattaaa ttcctcactt gtatggatag tagtacctga caatgttttg ggtttttttt
     1621 ttttttgaaa tttattgcgc atgtagagta cttgatcatc agggatatat caggtctcct
     1681 gtacagttaa atctcatgtc ctgtgacttc ctgtatgtat accctgggag ttctttactt
     1741 ggcaacattt gatttaataa acatgaaatc gtttcagact cgttgggatg aatcattgag
     1801 tcacattctc tttctgacgt tcctgaagtt tcaccccttc tcagacagaa agggccccat
     1861 gccctgtgga ggtggtgtgt tgtcgcctgc gttaatgcat ggggccaggt gtagtccagg
     1921 ccacttgtct cactgtgccc tgttgtgtag aagcattgaa aggagtcagt gttcagcttc
     1981 tcccattttc tacaagtgga attgcattcc tccacagtga atgagggctt ccctgctgga
     2041 tcactttact gtctaaaatt tgcattatcc aaaaagaact tccccctttg tgcaaagtgc
     2101 cagtgagccc agagaattat ttctttaatc atattattat ataatgtcct attacttcca
     2161 gctttgagtg tctcctactt gagatattgt acctatcctt accaggcgtg gatagtctcc
     2221 atagtgtttt cccagtgttg aattttattc ctctctctct ctctctctct ctctctctct
     2281 ttctctctct
//
