LOCUS       XM_039103585            8413 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC100910852
            (LOC100910852), transcript variant X1, mRNA.
ACCESSION   XM_039103585
VERSION     XM_039103585.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103585.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8413
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..8413
                     /gene="LOC100910852"
                     /note="uncharacterized LOC100910852; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     2 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:100910852"
                     /db_xref="RGD:6496250"
     CDS             352..8367
                     /gene="LOC100910852"
                     /codon_start=1
                     /product="uncharacterized protein LOC100910852 isoform X1"
                     /protein_id="XP_038959513.1"
                     /db_xref="GeneID:100910852"
                     /db_xref="RGD:6496250"
                     /translation="MDLTKEEDVGEKKRTVVYQSTAVIGTGWKKKKRYLTLFNDVLII
                     SSKLNKKKFKTKHVIPLTYLWVGDEVDAFRSDNTAVTKSIHLYWLTGHVVATFCSMEQ
                     TTWWYFFLQRSVREAKKHNKIEIPLEIFTEDIACCDTPLYVTATNFDTVNDIISKLLP
                     MIKHGTEGYQLWFCPGPREAPKALQGHEYTHDIIMINIQKNFSSRDLKNFKDISYLPG
                     ILMKYLNADVHWKFILKPRNSARSQQQKNMKKITFKKQRSSVTWQLDGASVPHQDKVC
                     TIPQVKKGGKLFGRELSSICQDGDLPSAILDMLYVLKKKGPTTKGVFIEPPSTTLFQT
                     VKDKLDSGEEVDIEKQSVHVVAWIFKDFLQNIEGSLMTSKLYDEWIAVTENVNDEEKL
                     AAVQSLLDKMPPENAALLRQLFRILYEIKNHSSINKMSSYHLSVGLAPCLLFVPSFCN
                     NGEINDIAKKISLLKFMIENSPQFFGEDLAAVWQGTSLYHRPGAKSSCSQSTPTNSGN
                     VKETKHGLSSSPSGRTCTPGYNTLRRNSAALLPYEGIIDSQKHEVNIYTNPTVPSLNP
                     PQAKKKCLFGKSLTSLFKDKKLPAPIVDMLSIIAEKGPESDHIFKSLPKESHWSLRYR
                     LDNEQQIDWDKECVLVIASVLKDFIVNIDGSLLTLSLYENWLCITDERTMTGKINAIQ
                     SLLQQIPEPNFILLKHLICVLEIIKDSSMNNLDSYRLSHRIAPNVLLGTSRISLFGND
                     VLRKMSIIQIMIDNYQKIFGNNDMFIKYIDNKSDDLRMRKASINFSGKSPVMSKVMTC
                     YNWKTCGNNKKNILCAALQEERPTEKYEGKVYTNPPVRCLFPLRPAKKCLFKQPLMTI
                     FEDRELHTPIIDFIFNIDGTSLTLTVYENWLCIPEEGTLAEKINVIQSHLHQIPEPNF
                     ILLKYLICLLVMVKDSSMNNLDRSRLSVCIAPCGSRGLTSRNSLLGNDILRKLSVIQI
                     MIDNYHKIFGNDDMFNKHIEKKSDDLRMLKESKNSSVKSPVMTKVIACYNWKACGNNK
                     KNNISCAALQEESPTEKYEGKVYTNPPVRCLYPLRPAKKCLFNQPLMTIFENKELHTP
                     IIDFIINIDGTSLTLTVYENWLCVPEEGTLAEKINVIQSHLHQIPEPNFVLLKYLICL
                     LVMVKDSSMNNLDRSRLSVCIAPCGSRGLTSRDSLFGNDILRKKLSVIQIMIDNYHKI
                     FGNEDIFNKHIDKKSDDLRMLKESKNSSVISPVMTKVIACYNWKACGNNKKNNISCAA
                     LQEESPTEKYEGKVYTNPPVCCLFPLRPATTCLFPQPLTSVFEDKKVHTPIIDYIINM
                     DSTSLTLILYENWLCIPEKGTLSGKFNVIQSLFQQVPEPNFILLKHLLCALTMLKDYS
                     MNNLDHHRLSVRIAPRGLRGQTSRDSLFGTDILREDFIINIDSTTHTLIMYENWLCIP
                     EKGTLSGEFNAIESLFQQVPESNFILLKHLLCALTMLKDSSMNNLDLSRSSVRIAPHG
                     LRGQTLRDLLFGTDIFIKDFIINIDSTTLTLIQYENWLCIPEKGTLSGEFNAIESLFQ
                     QVPESNFILLKHLLCALTMLKDSSMNNLDLSRSSVRIAPRGLRGQTLRDSLFGTDIFR
                     KDFIINIDSTTLTLIQYENWLCIPEKGTLSGEFNAIESLFQQVPESNFILLKHLLCAL
                     TMLKDSSMNNLDLSRSSVRIAPRGLRGQTLRDSLFGTDIFRKDFIINIDSTTLTLIQY
                     ENWLCIPEKGTLSGEFNAIESLFQQVPESNFILLKHLLCALTMLKDSSMNNLDLSRSS
                     VRIAPRGLRGQTLRDSLFGTDIFRKDFIINIDSTTLTLIQYENWLCIPEKGTLSGEFN
                     AIESLFQQVPESNFILLKHLLCALTMLKDSSMNNLDISRSSVRIAPRGLRGQTLRDSL
                     FGTDIFRKDFNINIDSTTLTLIQYENWLCIPEKGTLSGEFNAIESLFQQVPESNFILL
                     KHLLFALTMLKDSSMNNLDLSRSSVRIALHGLRGQTLRDSLFGTDIFRKDFIINIDST
                     THTLIMYENWLCIPEKGTLSGEFNDIESLCQQVPESNFILLKHLLCALTMLKDSSMNN
                     LDLSRLSVCIAPRGLRGQTLRDSLFGTDIFRKDFIINIDSTTLTLILYENWLCIPEKG
                     TLSGKCNAISSSRISRDLLFGTDILRKGFIINIDSTSLTLIQYENWLCIPEKGTLSGE
                     FNAIESLLQQVAEPNFILLKHLLCEIIMLKDSSMYNLDHYRLSLPIAPGGLRGQTSRD
                     SLFGTDILRKISLMQIMIHPCHQIFGNDDILFKHIEKSSEDLKKYKKSLNSSGESPNM
                     TKTIAGHNLNPCDKYEKFSISHSSLQEESPTEKQKGNIYTKPPVYSNPTPSRKKCLFG
                     KNLTSIFVDSKLPAPILDILSVIAEKGQESDQIFEILPENSHWSLRERIDGEELIDWN
                     EESVLVTASVLMDFITNIEGSLLTSDLYENWLSVSDEGSLVGKINIIQRLLLKIPQAN
                     FILLKYFIRVLVIIRESSMNNLDSNSLSNRIAPYVLWNQTTKNTLFGSDVSRKMSVIQ
                     IMIDNYHEIFGNDNIFCKGIDKRSGDLKMCTYSINSSGKSPITKEFLGGCNRKTCDNR
                     ENFKISSIALREEGPIGQNRTTTTYKWWGMTEGIIRSFNFNHPFYLPLNYKRRDYYNI
                     LLPHFFCMLYIVFYPNK"
ORIGIN      
        1 tataggtata tctacatcta tatgtatatt tatagttgtg aaaatgttat taaacacttg
       61 tggttctacc tgtgtacaaa aaaatttgtt ttatagccac agggagagta aatgaaatgc
      121 acatgtcact ttgccagatg acacgtgcct tagaatattg acatcacaat ggtccttcag
      181 cctgacaact acagaatcct cagacttcag tagttttcta gccactgcag tcaccagttt
      241 ggtgtctagg agcaggaaag caaacgaaaa tttcacattg tttgataaat tcttcattcc
      301 aggctctact aaaaaggtgg agctctgtat caggaaaatt atttgttcaa catggacttg
      361 actaaggagg aagatgtagg agaaaaaaag cgaaccgtgg tttaccaaag cactgcggtt
      421 atcggaacag gttggaaaaa aaagaaacgt tatctgacat tgttcaatga cgttttgata
      481 atatccagta aactgaataa aaagaaattt aagacaaaac atgtcattcc attgacttac
      541 ctgtgggtcg gtgatgaagt ggatgcattc aggtcagaca acactgctgt taccaaatcg
      601 attcatctat actggctgac gggacatgtt gttgccacct tttgttccat ggaacagacc
      661 acttggtggt atttctttct acaaagatcc gttcgtgaag ccaagaagca caacaaaata
      721 gaaataccct tggagatatt cactgaggat attgcatgct gtgacactcc tctatacgta
      781 acagcaacaa acttcgatac agtgaatgac ataatcagca agttactacc aatgataaaa
      841 catggcactg aaggttacca actgtggttc tgtcctggcc ctcgggaagc tccaaaagca
      901 ctccaagggc atgagtatac acatgatatt ataatgataa atattcaaaa gaacttcagt
      961 tcacgggact taaaaaattt taaagatatt tcttatcttc ctgggatact catgaaatat
     1021 ctaaatgctg atgtacattg gaaattcatc ttaaagccca gaaactcagc aagaagccag
     1081 cagcaaaaaa atatgaagaa aataactttt aagaaacaaa gaagttctgt aacatggcag
     1141 ttggatgggg cctctgtgcc ccaccaggac aaagtatgca ccatcccaca agttaaaaag
     1201 ggaggaaaac tgtttggaag agaactcagc tccatttgtc aggatggcga cctgccctca
     1261 gcaatcctgg acatgctgta cgtactaaaa aagaaaggtc ccacaaccaa gggtgtcttt
     1321 atagaacctc caagtacaac tttgttccaa acagtaaagg acaaattgga ttcgggagaa
     1381 gaggtggata tcgagaagca atcagttcat gtagtggcgt ggatctttaa ggacttcctc
     1441 caaaacatcg agggaagtct aatgacttca aaactatatg atgagtggat tgctgtaacc
     1501 gaaaacgtca acgatgaaga gaaattagcc gcagtgcaga gtcttttaga taaaatgcca
     1561 cctgaaaatg cggctcttct gaggcaactt tttcgtatat tatatgaaat taaaaatcac
     1621 tcttccatta ataaaatgtc ttcttaccac ctatctgttg ggttagcccc atgtctctta
     1681 tttgtgccga gcttctgcaa taatggagag ataaatgata ttgccaaaaa gatttctcta
     1741 ctgaagttta tgatcgaaaa ttcgccacag ttttttggcg aggacttggc tgcagtgtgg
     1801 cagggaacat cactatatca tcgtcccgga gcaaagtcct cgtgttccca gagtactcca
     1861 acaaatagtg ggaacgtgaa ggaaaccaaa catggactca gcagctcccc cagtggcagg
     1921 acatgcactc ctggctataa tacactgcgg agaaattcag ctgctcttct tccctatgag
     1981 ggcattatag attcacaaaa acacgaagtc aatatatata ctaacccaac agtaccatct
     2041 cttaatccac cacaagcaaa gaagaaatgt ctgtttggca aatctcttac aagtcttttt
     2101 aaagacaaaa agttgcctgc tccaatagtt gatatgttat ccataattgc agagaaaggt
     2161 ccagaatcgg atcacatatt caaaagtcta cctaaagaat cacactggtc cctgaggtat
     2221 aggcttgaca atgaacaaca aattgactgg gacaaggaat gcgttcttgt aatagcatcc
     2281 gttttaaagg attttattgt taacattgat ggaagcttac taacattgtc tttatatgaa
     2341 aattggcttt gcatcacaga cgaaagaact atgactggaa aaattaatgc cattcaaagc
     2401 cttttgcaac agattccaga accaaacttt atactattaa aacatctcat atgtgtatta
     2461 gaaataataa aagattcctc catgaataat ttagacagtt acaggttatc tcatcgcata
     2521 gccccaaatg tattattggg tacttcaaga atctcattat ttgggaatga cgtcttaaga
     2581 aagatgtcca ttatacagat catgattgac aactaccaaa aaatatttgg aaataatgat
     2641 atgtttatta aatatattga caataagtct gatgatctaa ggatgcgtaa agcgtcaata
     2701 aatttttctg gcaaatcacc tgttatgtca aaagtcatga catgctacaa ctggaaaaca
     2761 tgtggtaaca ataaaaaaaa tattttatgt gctgctctgc aggaggaacg tcctacagag
     2821 aaatatgaag gcaaagtata taccaaccca ccagtacgtt gtctatttcc attacgacct
     2881 gcaaagaaat gtttgtttaa gcaacctctt atgactattt ttgaagacag agagctacat
     2941 actccaataa ttgattttat ttttaacatt gatggaacct cacttactct gactgtatat
     3001 gaaaattggc tttgcatacc agaagaagga actctggctg aaaaaatcaa tgtcatccaa
     3061 agccatttac atcagattcc agaaccaaac tttatactat taaaatatct catctgttta
     3121 ttagtaatgg taaaagattc ttccatgaat aatttggacc gttccaggtt atctgtgtgc
     3181 atagctccat gtggatcacg gggcctgact tcgagaaact cattacttgg aaatgacatc
     3241 ttaaggaagt tgtctgttat acaaatcatg attgacaact accataaaat atttggaaat
     3301 gatgatatgt ttaataaaca tattgagaaa aagtctgatg atttaaggat gcttaaagaa
     3361 tcaaaaaatt cttctgtcaa atcacctgtt atgacaaaag tcatagcttg ctacaactgg
     3421 aaagcatgtg gtaacaataa aaaaaataat atttcatgtg ctgctctgca ggaggaaagt
     3481 cctacagaga aatatgaagg caaagtatat accaacccac cagtacgttg tctatatcca
     3541 ttacgacctg caaagaaatg tttgtttaac caacctctta tgactatttt tgaaaacaaa
     3601 gagctacata ctccaataat tgattttatt attaacattg atggaacctc acttactctg
     3661 actgtatatg aaaattggct ttgcgtccca gaagaaggaa ctctggctga aaaaattaat
     3721 gtcatccaaa gccatttaca tcagattcca gaaccaaact ttgtactatt aaaatatctc
     3781 atctgtttat tagtaatggt aaaagattct tccatgaata atttggaccg ttccaggtta
     3841 tctgtgtgca tagctccatg tggatcacgg ggcctgactt cgagagactc attatttgga
     3901 aatgacatct taaggaagaa gttgtccgtt atacaaatca tgattgacaa ctaccataaa
     3961 atatttggaa atgaagatat atttaataaa catattgaca aaaagtctga tgatttaagg
     4021 atgcttaaag aatcaaaaaa ttcttctgtc atatcacctg ttatgaccaa agtcatagct
     4081 tgctacaact ggaaagcatg tggtaacaat aaaaaaaata atatttcatg tgctgctctg
     4141 caggaggaaa gtcctacaga gaaatatgaa ggcaaagtat ataccaaccc acctgtatgt
     4201 tgtctatttc cattacgacc tgcaacgaca tgtttgtttc cccaacctct tacaagtgtt
     4261 tttgaagaca aaaaggtaca tactccaata attgattata ttattaacat ggattcaacc
     4321 tcacttactt tgatcctgta tgaaaattgg ctttgcatcc cagaaaaagg aactctgtct
     4381 ggaaaattta atgtcatcca aagcctgttt caacaggttc cagaaccaaa ctttatatta
     4441 ttaaaacatc tcttgtgtgc attaacaatg ctaaaagatt attccatgaa taatttggac
     4501 catcacaggt tatctgtgcg catagctcca cgtggattaa ggggtcagac ttcgagagac
     4561 tcattatttg ggactgacat cttaagagag gattttatta ttaacattga ttcaaccaca
     4621 cataccttga tcatgtatga aaattggctt tgcatcccag aaaaaggaac tctgtctgga
     4681 gaatttaatg ccatcgaaag cctgttccaa caggttccag aatcaaactt tatactatta
     4741 aaacatctct tgtgtgcatt aacaatgcta aaagattctt ccatgaataa tttggatctt
     4801 tccagatcat ctgtgcgcat agctccgcat ggattaaggg gtcaaacttt gagagactta
     4861 ttatttggga ctgacatctt cataaaggat tttattatta acattgattc aaccacactt
     4921 accttgatcc agtatgaaaa ttggctttgc atcccagaaa aaggaactct gtctggagaa
     4981 tttaatgcca tcgaaagcct gttccaacag gttccagaat caaactttat actattaaaa
     5041 catctcttgt gtgcattaac aatgctaaaa gattcttcca tgaataattt ggatctttcc
     5101 agatcatctg tgcgcatagc tccgcgtgga ttaaggggtc aaactttgag agactcatta
     5161 tttgggactg acatcttcag aaaggatttt attattaaca ttgattcaac cacacttacc
     5221 ttgatccagt atgaaaattg gctttgcatc ccagaaaaag gaactctgtc tggagaattt
     5281 aatgccatcg aaagcctgtt ccaacaggtt ccagaatcaa actttatact attaaaacat
     5341 ctcttgtgtg cattaacaat gctaaaagat tcttccatga ataatttgga tctttccaga
     5401 tcatctgtgc gcatagctcc gcgtggatta aggggtcaaa ctttgagaga ctcattattt
     5461 gggactgaca tcttcagaaa ggattttatt attaacattg attcaaccac acttaccttg
     5521 atccagtatg aaaattggct ttgcatccca gaaaaaggaa ctctgtctgg agaatttaat
     5581 gccatcgaaa gcctgttcca acaggttcca gaatcaaact ttatactatt aaaacatctc
     5641 ttgtgtgcat taacaatgct aaaagattct tccatgaata atttggatct ttccagatca
     5701 tctgtgcgca tagctccgcg tggattaagg ggtcaaactt tgagagactc attatttggg
     5761 actgacatct tcagaaagga ttttattatt aacattgatt caaccacact taccttgatc
     5821 cagtatgaaa attggctttg catcccagaa aaaggaactc tgtctggaga atttaatgcc
     5881 atcgaaagcc tgttccaaca ggttccagaa tcaaacttta tactattaaa acatctcttg
     5941 tgtgcattaa caatgctaaa agattcttcc atgaataatt tggatatttc cagatcatct
     6001 gtgcgcatag ctccgcgtgg attaaggggt caaactttga gagactcatt atttgggact
     6061 gacatcttca gaaaggattt taatattaac attgattcaa ccactcttac cttgatccag
     6121 tatgaaaatt ggctttgcat cccagaaaaa ggaactctgt ctggagaatt taatgccatc
     6181 gaaagcctgt tccaacaggt tccagaatca aactttatac tattaaaaca tctcttgttt
     6241 gcattaacaa tgctaaaaga ttcttccatg aataatttgg atctttccag atcatctgtg
     6301 cgcatagctc tgcatggatt aaggggtcaa actttgagag actcattatt tgggactgac
     6361 atcttcagaa aggattttat tattaacatt gattcaacca cacatacctt gatcatgtat
     6421 gaaaattggc tttgcatccc agaaaaagga actctgtctg gagaatttaa tgacatcgaa
     6481 agcctgtgcc aacaggttcc agaatcaaac tttatactat taaaacatct cttgtgtgca
     6541 ttaacaatgc taaaagattc ttccatgaat aatttggatc tttccagatt atctgtgtgc
     6601 atagctccgc gtggattaag gggtcaaact ttgagagact cattatttgg gactgacatc
     6661 ttcagaaagg attttattat taacattgat tcaaccacac ttaccttgat cctgtatgaa
     6721 aattggcttt gcatcccaga aaaaggaact ctgtctggaa aatgtaatgc catctccagt
     6781 agcagaatct cgagagactt attatttggg actgacatct taagaaaggg ttttattatt
     6841 aacattgatt caacctcact taccttgatc cagtatgaaa attggctttg catcccagaa
     6901 aaaggaactc tgtctggaga atttaatgcc atcgaaagcc ttttgcaaca ggttgcagag
     6961 ccaaacttta tactattaaa acatctcttg tgtgaaataa taatgctaaa agattcttcc
     7021 atgtataatt tggaccatta caggttatct ttgcccatag ctccaggtgg attaaggggt
     7081 cagacttcga gagactcatt atttgggact gacatcctaa gaaagatatc tcttatgcaa
     7141 atcatgattc acccgtgcca tcaaatattt ggaaatgatg atatattatt taagcatatt
     7201 gaaaaaagtt ctgaagattt aaagaaatat aaaaaatcac taaattcttc tggtgaatca
     7261 cctaatatga caaaaaccat agctggccat aacttgaatc cctgtgataa atatgaaaaa
     7321 tttagtattt cacattcttc actgcaggag gaaagtccta ctgagaaaca gaaaggcaat
     7381 atatatacca agccaccagt atattctaat ccaacaccat caagaaagaa atgcttattt
     7441 ggcaaaaatc ttacaagcat ttttgtcgac agtaagctgc ctgctccaat acttgatata
     7501 ttatccgtaa ttgcagagaa aggacaagaa tcagatcaga tattcgaaat tctacctgaa
     7561 aattcacact ggagcctcag agagaggatt gatggtgaag aactcataga ctggaatgaa
     7621 gaaagtgttc tagttacagc atccgtgctg atggacttca ttacaaacat tgaaggaagt
     7681 ttacttactt ctgacttata tgaaaattgg cttagcgtct cagatgaagg atcgctggtt
     7741 ggaaaaatta atatcatcca aaggctttta ctgaagattc ctcaggcaaa ctttatcctt
     7801 ctgaaatatt tcattcgcgt attggtaata atacgagagt catccatgaa taatttagac
     7861 agtaacagtt tatctaaccg catagctcct tatgttttgt ggaatcagac tacaaaaaac
     7921 acattgtttg gcagtgatgt atcaagaaag atgtctgtta tacaaatcat gatagacaac
     7981 tatcatgaaa tatttggaaa tgacaatata ttttgtaaag gtattgacaa aagatctggg
     8041 gatttaaaga tgtgtacata ttcaataaat tcatctggaa aatcacctat tacgaaagaa
     8101 ttcctaggtg gctgcaatag gaaaacatgt gataacagag aaaattttaa aatttcatcc
     8161 attgctctgc gggaggaagg tcctatagga caaaacagaa ctaccaccac atataaatgg
     8221 tgggggatga ctgaagggat tataaggtca ttcaatttta atcatccctt ctaccttcca
     8281 cttaattata agagaagaga ttattacaac atcttgctcc cacatttttt ctgtatgtta
     8341 tacattgtct tctatcctaa taaatgatat aacaaataaa actattgcgt acactccaat
     8401 gtgccttgtt cat
//
