LOCUS       XM_039096139            1287 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus serine/arginine-rich splicing factor
            3-like (LOC100910660), mRNA.
ACCESSION   XM_039096139
VERSION     XM_039096139.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039096139.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1287
                     /gene="LOC100910660"
                     /note="serine/arginine-rich splicing factor 3-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 6 ESTs, 4 long SRA reads, 5 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:100910660"
                     /db_xref="RGD:6497369"
     CDS             115..558
                     /gene="LOC100910660"
                     /codon_start=1
                     /product="serine/arginine-rich splicing factor 3-like"
                     /protein_id="XP_038952067.1"
                     /db_xref="GeneID:100910660"
                     /db_xref="RGD:6497369"
                     /translation="MHRDSCPLDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARN
                     PPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKRSRNRGPPPSWGRRPRD
                     DYRRRSPPPRRRSPRRSFSRSRSRSLSRDRRRERSLSRERNHKPS"
ORIGIN      
        1 ttcgtggacg ccgcgggagt gagagcatct gtggaagcag tgccagaggg aagcgggtgg
       61 gcctgtcgga gcgttaggat ttgagcttgg gcattttgaa tccaggatct cgaaatgcat
      121 cgtgattcct gtcccttgga ctgtaaggtt tatgtaggta atcttggaaa caatgggaac
      181 aagactgaat tagaacgggc ttttggctat tatggaccac tccgaagtgt gtgggttgct
      241 cgaaaccctc ctggctttgc tttcgtcgaa tttgaggatc cccgagatgc tgctgatgct
      301 gtccgagagc tagatggaag aacactatgt ggctgccgtg taagagtgga actgtcgaat
      361 ggtgaaaaga gaagtcggaa tcgtggcccg cctccctctt ggggtcgtcg tcctcgagat
      421 gattaccgca ggaggagtcc tccacctcgg cgcagatccc caaggagaag cttttcgcga
      481 agccggagca ggtctctttc tagagatagg agaagagaaa ggtctctgtc tcgtgagaga
      541 aatcacaagc cgtcttgatc cttctctagg tctcgtagct gatctaggtc aaatgaaagg
      601 aaatagaaga ccagttggca aaagtggtgt acaggaaata acttcatttg acaggagtat
      661 gtacaggaaa ttaaagtttt gtttgagact tcataagctt ggtgcatttt taagatgttt
      721 tagctgttcg aatttgattt gtctcttgga acagtgacac acaaaacgat gtaattctct
      781 atggtttcaa atggatcata tgaggcatgt gatatcaaga actgttactt tacaatgttc
      841 ccttaagcga gattgaattt tctttgaatt ttagtttttc atagactgaa ataaacctag
      901 atcctgccca gtttgaagtg atgtactgat gacgtcaagc acctagcgga aatggactaa
      961 agctgtagtt cccctagtga ctgagacaca gtgtggcact gtgggtgaaa tggtgagcag
     1021 cctttaaaag ctgctgcgaa cacaaccaac agataaaggg taggaaccac actctgaagg
     1081 ttttcacagt ggttccttcc tggttgctgt acggggatgc agagctgtct aacgtcttta
     1141 tttggaaatg taaaactaag ataccagtgt cctatcagtt taagggtaca ttgtagagct
     1201 gaactcagtt actgtgcaag attttttttc atgctgtcat ttgtaatatg tttgtgagaa
     1261 tccttgggat taaagttttg gatacaa
//
