LOCUS       XM_006240826            5322 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 709-like
            (LOC100910577), transcript variant X1, mRNA.
ACCESSION   XM_006240826
VERSION     XM_006240826.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006240826.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006240826.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5322
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5322
                     /gene="LOC100910577"
                     /note="zinc finger protein 709-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     ESTs, 1 long SRA read, 12 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 131 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:100910577"
                     /db_xref="RGD:6497573"
     CDS             304..2067
                     /gene="LOC100910577"
                     /codon_start=1
                     /product="zinc finger protein 431 isoform X1"
                     /protein_id="XP_006240888.2"
                     /db_xref="GeneID:100910577"
                     /db_xref="RGD:6497573"
                     /translation="MVSTISCGADAVTFMDVHVNFSQEEWALLDPSQKSLYKDVMLET
                     YWNLTFIGYEWEDHNSEECCQGSRSHGRYFNCPQYSTCKAKGYGKKQYTSLFPRTIRR
                     CDIIPTVRRQGEWDTSLQVIGFPASVGIHQNTDVGEKPYAYKECGKSSLCPGLLCICS
                     ITQTVGKCYEYNQCGKALSSSFSLQRCKTAHLAKGSNGCEPSSKSFNHHRYLKIQSTT
                     YNEKDLYDGIQCDKASLQLHQKTNSKITPYEYNEGDKVITFHCHHHICRMNTRDTKCE
                     YHQCGKSFACPSYLQIHEKIHTRKKPYECDQCGKFFAYKSHFHKHQRTHTGEKPYECG
                     QCGKAFSCNGNLQIHERIHTGEQPYKCNQCGKAFAYSNSLHKHERTHTGEKPYECNHC
                     GKAFTCHSTLQIHERIHTGEKPYKCSQCGKTFARNSHVKMHERIHTGEKPYKCNQCGK
                     AFAYHSHLQRHERTHTGEKPYECNQCGKAFAYRSSLRLHETSHTGEKPYECKQCGKTF
                     ACSSYLQIHLRIHSGEKPFQCKHCCKTFSYRSSLHMHEKNHTGEKPFECKECGISFAY
                     LGTLQKHERIHTDKKENFPEG"
ORIGIN      
        1 gaccgggcag ctagaatggg gagggtactt ccggtccgcc atactgcagt tctagctgag
       61 actgtggaaa tctgttgtgg ttccgtgtgc tttgctgtga cctgttgccg ggagctgtga
      121 ggagagctgt gcgagctcgc gaccggcacc atgtcatgga ctagcatcta tgtcagaaga
      181 taacagagta gctgaattgt tggccatgag tttctcaaac ccagctggag ggtgagccag
      241 aagtatggcc tggtactggg tcacacaggc attagacagc cagtatttgg tgcttctcga
      301 aggatggttt caaccatttc atgtggtgct gatgcagtga cttttatgga tgtgcatgtg
      361 aacttctctc aggaagagtg ggctttgctg gatccttctc aaaagagtct ctacaaagat
      421 gtcatgctgg aaacctactg gaaccttact tttataggct atgaatggga agaccacaat
      481 agtgaagaat gttgtcaagg ttctagaagt catggaaggt atttcaactg tcctcaatat
      541 agtacatgta aagcaaaggg ttatgggaag aagcagtata cttctctctt tcccagaaca
      601 attagaagat gtgatatcat ccccactgtg agaagacaag gtgaatggga cacaagttta
      661 caagtaattg gttttccagc ttcagtggga atacatcaaa atactgacgt tggagaaaag
      721 ccttatgcgt acaaggaatg tggaaaatct tctctctgtc ctggtttact ttgcatatgt
      781 agtataactc agactgtagg aaaatgttat gaatacaatc agtgtgggaa agcactcagt
      841 tcttcttttt ctcttcaaag atgtaaaaca gctcacctgg caaaaggaag taatggatgt
      901 gagccaagta gtaaaagctt taaccatcat aggtatctta aaatacagag cacaacctac
      961 aatgaaaagg atctctatga tggtattcaa tgtgataaag cctctttaca attacaccaa
     1021 aaaactaatt ccaaaataac accctatgaa tataatgaag gagataaagt catcacattt
     1081 cactgtcatc atcacatatg tagaatgaac actagagaca caaagtgcga atatcaccaa
     1141 tgtggtaaat cctttgcatg tcctagttac cttcaaatac atgaaaaaat tcatactaga
     1201 aagaaaccct atgaatgtga tcagtgtggt aaattttttg catataaaag tcattttcac
     1261 aagcatcaaa gaactcatac tggagagaaa ccctatgaat gtggtcaatg tggtaaagcc
     1321 ttttcatgta atggtaatct tcaaatacat gaaagaattc atactggcga gcaaccctat
     1381 aaatgtaatc aatgtggtaa agcctttgca tatagcaata gtcttcacaa gcatgaaaga
     1441 actcacactg gagagaaacc gtatgaatgt aatcattgtg gtaaagcctt tacatgtcac
     1501 agtaccctgc aaatacatga gagaattcat actggagaga aaccatataa atgcagtcaa
     1561 tgtggtaaaa cttttgcacg taacagccat gttaaaatgc atgaaagaat tcatactgga
     1621 gagaaaccct ataaatgtaa tcaatgtggt aaagcctttg catatcatag tcatcttcaa
     1681 aggcatgaaa gaactcacac tggagaaaaa ccttatgaat gtaatcaatg tggtaaagcc
     1741 tttgcatatc gcagtagtct tagactacat gaaacaagtc atactggaga gaaaccatat
     1801 gaatgtaagc aatgtggtaa aacctttgcc tgttccagct atcttcaaat acatttaaga
     1861 attcatagtg gagagaaacc ctttcaatgt aagcattgtt gtaaaacctt ttcatatcgc
     1921 agtagtcttc acatgcatga aaaaaatcat actggagaga aaccctttga atgtaaggaa
     1981 tgtggtatat cttttgcata tcttggtact cttcaaaagc atgaaagaat acatactgac
     2041 aaaaaagaaa atttcccaga aggctaataa atgaagtata ctatttcaaa ccacagtcat
     2101 tgtctgcact gagctctctc tctggtgctt gagtaacagt acagatatta tatcattaaa
     2161 atgtctcctt ttcaaattgc caacatattg tcatctaaga ataaaggaac ccactgtctc
     2221 atgacaattt aaatagtaaa atcttggtgt aaatgaaaat gttatttatg ttgtcattat
     2281 tttttaatat aacgtaagtt tatgctaagg aaaatatact ttttcttaac atcttctcag
     2341 aatgacaatg aataccagag agttagctca gggattgaag gtggttgctg ctaaccttgt
     2401 tgacctgact tcattctctt ggatagccac attactcatg caagtttttc tctgaataat
     2461 atacttgtgt tttatgcata caacacaccg gattgtaaca taaatattgt tgaaactgaa
     2521 ataaaacaaa tgcattgtcc cacaaattta gggcacttgc gccaaatttg ataagattgg
     2581 tgttttgcac atagagaaac tagagacgtg taagttgttc actaactagc atatgcacac
     2641 catgggtgta tacacacaat ttagaaattt taaaaagatg aaatttacaa agcaaagaaa
     2701 ttaagcaaaa tattcagaac acaggatatt atttaatatt aattaaatag atttaattaa
     2761 taataggtgt aattaataga ttgtaaaatt ctaagtatta ctattcaaaa cagagggtcc
     2821 tgtttacatc ttacattagc ctttcattct ctgcttcagt gatgggtcat tttaaaaaca
     2881 tatgtgaggt aggtatagtg gtgcacacat gtagtgactc atgaatagag gagtctgatg
     2941 aatgaccgtg ctgtttctag gcattgcacc ctaggactgt atattttgaa gcagagtgta
     3001 tgttcagaga ttgagcatca cactgtaaac cagtgtaaat catgtgtaat tctgtctgtt
     3061 gcattgaaga acccgagcag gtaaaaatca gtgaagcttt tctagaaatc agggcaccct
     3121 tacctgcctt tgtggcatct ataaattctc cttgtgcaga gagtatctgc tgaagcacat
     3181 ttaggaaata gactagcttg tttttatgca aatcaatagg ttcactaaaa ggaaaatggt
     3241 tatcaacttg aaagggatct gtggaaaaag ccagtgctac attatctgaa gaattcagat
     3301 attaaaattt ccaccgttct tatcataaaa aaaaatgttc tattggttct tgaccaaata
     3361 attgtgagac ctgcccagaa ttatcaatcc tggaaccaca ggctaataat agaatgaaaa
     3421 ccttttttgg attaataaag aaatgtatca ttctattggc ctgttatccc agaacagttc
     3481 catagcgatg ctgtgagaaa ggatagctaa taatgcagga acagtatagg aataggagat
     3541 atgctgaact taggagatat gctgaacctg agtattccta aatgcatttt tgtcctgctt
     3601 taatactgta catgcaagtt cactgcagtt ttggggagat gaggatcaag attcccctta
     3661 agaacatcaa ataaaagttg cagttgtgct gtgggaattt ttaacatagg tttaatccaa
     3721 ttcaagtccc ctacctgttt ctggaaatca tttgagattt tccagtgtct tttctaaact
     3781 ataagaatga ctgttgaagg cattatcagt ttttctcgat agaagattgg aataatacat
     3841 tgatttctat gggggggcta taatgaattt atagttgatt aatccaattt ttacctcaac
     3901 aaataacttc taggatttta ttatttttag ccaaaacaga atgtcatcca tatgagtgta
     3961 ataaaagcca gaagatgtaa ctctagctct cttccaagta gtagcaacaa attttgacac
     4021 caagttgggt tatttgtcat tcctatggta aaactttcca aagccatcct tccattggtt
     4081 cagataagtt taaaaaagaa agtacactga aagcaaatct tttacaatct ttaggataca
     4141 aaagtatagt atagaaacgg tccattaaat ctaacagtgt aataagtcat tccataggaa
     4201 tagtaacagc tgtggaaagc ctggttgtaa aggtccagtt aatcctgtgg taacgttcac
     4261 ttgatacaga tcttatagca aacaccattt tcctccttaa tcaccaaaac aggagaatcg
     4321 tgtccatggt cagattcttt taatctgctc tttctttcag atgttccaag agtaatggct
     4381 gggagactcg tgtcttttat ttttttatgg ggatcttcag aaagccaggt tacaggatca
     4441 tcatgatact attcaggaac tcctagcaaa aatacaccaa gttttgtctg ttacatttta
     4501 gaataggatt tcaaaattgt tatttcttgc aactcctttc ccagactgtt tccagcagtt
     4561 gatccttgtg agaacatcat ctgttcagca ggggtattgg gcatgcctag gttttaaaca
     4621 acatctcaaa aatgaaccgc cagcactcac agcacatatg cctggaagga aactgattta
     4681 ccctcatcag ttttccaatt aagaattttg gaactttttg aggcccatgg gaaactccta
     4741 ctcctctgag ctctgcttgg gtgccatgaa taggccagtg ggaaggccaa gattgatggg
     4801 aaagaagtga gatcttgaca ccagtgtcta gcaatccctc aaatttctta cctactatcc
     4861 atagagacct ggtgttcctc tttagcagtt ccatctagta cacatctgag gacccaaaga
     4921 cattctctgc cacattcctg aacagacttt atccagttaa actttgttca ataaccgtta
     4981 acaatacatt gtccttttcc taaagtttgg atgccaagag gaacagaagc catagcttta
     5041 ttctcaccaa atataatccc attctatagt tcctggaaaa atctgcaagt cctttatggt
     5101 gacactcctt atggcaaaag gcccaaatat tccagtaggt gtgatctgga cctccatttc
     5161 ttgtgttaat atgtatctgg agttgagacc gaggtcatta agatttttcc tgaaaagttt
     5221 tggtgcatag gagtggtggg cattaaaaat ggctgttggg ttgacattct cccctgaaaa
     5281 taagtctgat gccttcatgt agtttctatg aaaaaaaaaa aa
//
