LOCUS       XM_039092888            1898 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC100910108
            (LOC100910108), mRNA.
ACCESSION   XM_039092888
VERSION     XM_039092888.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 21% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1898
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1898
                     /gene="LOC100910108"
                     /note="uncharacterized LOC100910108; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein, and 75% coverage of the annotated genomic feature
                     by RNAseq alignments"
                     /db_xref="GeneID:100910108"
                     /db_xref="RGD:6500116"
     CDS             102..1898
                     /gene="LOC100910108"
                     /codon_start=1
                     /product="transmembrane protease serine 9-like"
                     /protein_id="XP_038948816.1"
                     /db_xref="GeneID:100910108"
                     /db_xref="RGD:6500116"
                     /translation="MDPEGISARRYVETLSREKPTLMPPPQLGPQDKHLMEPLSFKES
                     ILNVSLSGCHLSMVWKDNLQALWLYKTAVLSHETTECGLRPGLVPHCPNCWEAEIGEF
                     PWMVSVQLSYSHFCAGSILNEKWILTSARCANFVKRSEALALVQVGLVDLQDATQGEI
                     VGIHRSMPYLGSSGPLGPGLLLLKEPLQFQPWVLPICLVESLDQERHIQLYDCWLPSW
                     SLMREAKKAMGESGCKGDLGAPLVCHLQHKDTWVQMGILIHFDEQCKKPYVFSHVSPF
                     ISWLQRVTQPSHAPWSNQEPVTISVSNSVTVFTNRKVSKFTASVESTPHFISLSEPQA
                     LGDHISLQYTMPWQALISSCGNQICSGSMINSYWVLTAAHCVRHMNPKDTVVILGFRN
                     PGTTLKIVKVTSILLNEEFRLSNQGVRNDLALVRIQEGQGSVPIVAPLGNIRNLNTSE
                     CWLSGPQIVNPGDILENPEVLQIQLMGASNCAYLYPDIGGSTVCYASQARGPEINMES
                     VSPGSTVMCRPISGNGKWIQIGLTSLKHLATIVSPHFSWILSSTAKAGYPLNPDFNPW
                     VENPKSSSLVRRPTTPLFYFGMTLAVMRMFIL"
ORIGIN      
        1 gcacatatat ggaaagagac cacattttca aaagtcatat attggactca aactgaatcc
       61 ctgtcagtaa cccagtcaac acaggattca gtagtcacac catggatcca gaggggattt
      121 ccgcaagaag atatgtggag acgctttcaa gggagaaacc taccctgatg cctccacctc
      181 aacttggccc tcaagataag cacttaatgg aaccactgtc ttttaaggaa tcgatactta
      241 atgtttcctt gtcgggatgt caccttagta tggtatggaa agataatctt caagctctat
      301 ggctctacaa aacagcagtt ctttctcatg aaaccacaga atgtggttta cgccctggcc
      361 ttgtccccca ctgtcccaac tgctgggaag ctgaaatagg tgaatttcct tggatggttt
      421 ctgtgcaact ttcttactcc cacttctgtg caggctccat acttaatgaa aagtggatcc
      481 ttacgtctgc tcgatgtgcc aattttgtaa aacggtcaga agctctggct ttagtccaag
      541 tggggctggt tgatcttcag gacgctacac agggtgaaat cgtagggatt caccgttcca
      601 tgccatattt aggttccagt ggaccattgg gacctggcct gctcttgttg aaggagcccc
      661 tacagtttca accttgggtg cttcctattt gcttggtgga gagtctggat caggagagac
      721 atatccagct gtatgactgc tggctaccca gttggtccct tatgagggaa gccaagaaag
      781 ctatggggga atctggctgc aagggtgatc ttggggcacc tttggtctgt catctgcaac
      841 ataaagacac gtgggtgcag atggggattt taattcactt tgatgaacag tgcaaaaagc
      901 cctatgtctt cagccacgtt agtcctttca tttcctggct ccagagagtc acacagccca
      961 gccacgcccc ctggtccaat caagaacctg tgactatttc agtttctaat tccgtgacag
     1021 tctttaccaa tagaaaagtc tcaaaattta cagcttcagt tgaatctact ccacacttca
     1081 tctctctgtc agagcctcag gctttagggg atcatatttc tctgcaatat acgatgccat
     1141 ggcaggctct gatctccagc tgtggcaatc agatctgcag tggctccatg attaatagct
     1201 actgggttct caccgctgcc cactgtgtca ggcacatgaa tcccaaagac actgttgtga
     1261 tactgggctt tcggaatcct gggacaactc tgaaaattgt taaggtgact tctattttac
     1321 tgaatgaaga attccggtta tcaaatcagg gtgtgagaaa tgacctagct cttgtgagaa
     1381 ttcaagaagg ccagggttct gttcccatag tggcgccttt gggcaatatt aggaatctaa
     1441 acacctcaga atgctggctg tctggacctc agattgtcaa cccaggggat atacttgaaa
     1501 acccagaagt tctacagata caattgatgg gagcttccaa ctgtgcctat ctctacccag
     1561 acataggggg ttctactgtt tgctatgctt cacaggccag gggacctgaa ataaatatgg
     1621 agtcagtgag tcctggaagc actgttatgt gcaggccgat atctggcaat ggcaaatgga
     1681 tacaaatagg tctcaccagt ctcaaacatt tagctactat agtgagccca cacttttcct
     1741 ggatcttgtc atccacagca aaggcaggtt atcccttaaa cccggatttc aatccttggg
     1801 tagaaaaccc gaaatcctct agtcttgtta gacgtccaac cacaccgcta ttttactttg
     1861 gaatgactct tgcagtgatg aggatgttta ttttgtag
//
