LOCUS       XM_039106108            2117 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus spindlin-2-like (LOC100910078),
            transcript variant X3, mRNA.
ACCESSION   XM_039106108
VERSION     XM_039106108.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2117
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2117
                     /gene="LOC100910078"
                     /note="spindlin-2-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 63 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:100910078"
                     /db_xref="RGD:6500561"
     CDS             209..1003
                     /gene="LOC100910078"
                     /codon_start=1
                     /product="Y-linked testis-specific protein 1-like"
                     /protein_id="XP_038962036.1"
                     /db_xref="GeneID:100910078"
                     /db_xref="RGD:6500561"
                     /translation="MKPEHRTIATRRWTRSVVVYHTMSTAKKKSMSLRRMSTPSFQKR
                     RRRRPSPQALGDIVGCRISHGWKEGDEPITQWKAIVLDQLPTNPSLYLVKYDGIECVY
                     GLALHSDERILKLKVLPHKVVFPQVKDAHLASAMVGRVVEHKFEGKHGSKDNWRGVVL
                     AQVPIMKDWFYITYEKDPVLYIYQLLDDYTEGNLRIIPETPPAHVKSDVDSDILTDQC
                     VQFTRSDGSKKIGEVIYQVLAKSSVYFFKFDGNVHIYFYDLVEKNR"
ORIGIN      
        1 gtgggttcac tatcttccca gcggggtgtg aaagccagtt cagctcctga accccacaat
       61 tgttcaacag ccttttggtg cctgaccggt ttccgaagac agaatctgga cgactaggac
      121 attttctttc ggcactcaca tgacagaggc aacagcattg tgtctggttt aagcaggcga
      181 gctcttcaaa cccaggccat gaccaagtat gaagcctgaa cacagaacga tagccacaag
      241 acggtggacc aggagtgtcg tggtctacca cacaatgtct acagccaaga agaagagcat
      301 gtctctgagg aggatgagca caccatcctt ccagaagcgg aggaggagga ggccttctcc
      361 ccaggccctg ggggacattg tgggctgcag aatttctcac ggatggaagg aaggtgatga
      421 gcccatcacc caatggaagg ccatcgttct agatcaactg ccaacaaatc cctctctcta
      481 tctggtcaag tatgatggaa ttgaatgtgt ctacggactg gcacttcaca gcgatgagag
      541 gattttaaag cttaaggtct tgcctcacaa agtagtgttt cctcaagtga aagatgccca
      601 tctcgcaagt gccatggttg gccgagttgt ggagcataaa tttgagggca aacatggctc
      661 taaggacaac tggagggggg tggtcctagc ccaggtgccg atcatgaagg actggtttta
      721 catcacctac gagaaagatc cagtcctata catctaccag ctcctggatg attacacaga
      781 aggtaacctc cgtatcattc cagagactcc tccagcacac gtgaagtcag acgttgacag
      841 cgacatctta acagatcaat gtgtgcagtt caccagaagc gatggatcca aaaagatcgg
      901 cgaagtcatt taccaagttc tagccaagtc ttccgtgtac ttcttcaagt ttgatggcaa
      961 cgtccacatc tacttctatg atctggtgga aaagaaccgt taaggtgaaa ttcacaaagt
     1021 gagggggaca tagatgggaa atttatagga ttggggggaa aatggttgtt tttctgtgtt
     1081 tcagataccc acatgccttt gacaacccca gtatcttttc cagtggaatt tgtttttcct
     1141 ctaaaaatta aaatgtgcga tgtgacgtgt tgtgtgtaaa cactttggtg gaggagacag
     1201 gctgtggtgg atggaacatg gagaggatga tctggggaga cggcagaggg gtaaagccaa
     1261 gtgtgtggtc acacatgcaa acaccagggc ttggtatggg aacaggagga tgaccggggc
     1321 ttcctgacag tgagcctcac ctcaggttca gcaggagacc ccgtcacaag ggaatactat
     1381 aggtagtgaa ggagcagaac acgctctacc ctccccagcc tctgaactta catctctcta
     1441 tccacacaca cgcacacaca catataaata tgactacagt atacgagagg cttgcatagg
     1501 ttatatgcaa atgcagtgtc gctttatcca aggaacctga ggagttttag atcattggga
     1561 gtcctggggc caactctcag aggacacgat atatctcctt attgtgcaaa cgaatccttt
     1621 gttgagtgtg tgtcagtgac tccacacagt tctcctcctc taggttcctt tgtatcacag
     1681 agaatgatct ggaaatactg aaacaaatat aaactaaagg ctttgttggg gtttctaggc
     1741 ttgcgttaaa atcatattta tcacgtttta ttaaatggaa gggaaatctt cagctcccag
     1801 caacaataga atcaatcatg ttggcttctg ttttatccca ttatgaatag caattacttg
     1861 cacatcaata gctcaccatg gtttgtacta aatcaggatg aagggatatg tttccgtaca
     1921 gataagtaaa gccaatgtgg ataatcaagg agaagcgggg gaggtatgat gcctttggct
     1981 tatgggagag ttatggtttg cttggatact tgttatgaaa ataaccctaa cctctacaaa
     2041 tgaaatgtaa cgataaaata tactaccaaa cgggatggac aatcattatt tgatttcctt
     2101 aaacgaaaaa aaaaaca
//
