LOCUS       XM_039111065             488 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 60S ribosomal protein L31-like
            (LOC100910017), mRNA.
ACCESSION   XM_039111065
VERSION     XM_039111065.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111065.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..488
                     /gene="LOC100910017"
                     /note="60S ribosomal protein L31-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 52 long SRA reads, 34 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:100910017"
                     /db_xref="RGD:6500827"
     CDS             59..433
                     /gene="LOC100910017"
                     /codon_start=1
                     /product="60S ribosomal protein L31-like"
                     /protein_id="XP_038966993.1"
                     /db_xref="GeneID:100910017"
                     /db_xref="RGD:6500827"
                     /translation="MAPAKKGGEKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRA
                     LKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYCIRVHLSRKRNEDEDSPNKLY
                     TLVTYVPVTTFKNLQTVNVDEN"
ORIGIN      
        1 cgcgactttc catcccacaa tccctcgcgc ccttcctttc caacttgggc ccggcagaat
       61 ggctcccgca aagaagggtg gcgagaagaa gggccgttct gccatcaacg aggtggtgac
      121 ccgagaatac accatcaaca ttcacaaacg catccatgga gtgggcttca agaagcgtgc
      181 tcctcgggca ctcaaagaaa ttcggaaatt tgccatgaag gagatgggaa ctccagatgt
      241 gcgcatagac accaggctca ataaagccgt ctgggccaaa ggaataagga atgttccgta
      301 ctgcatccga gtacatttgt ccagaaagcg taatgaggat gaggattcac caaacaagct
      361 ctacacactg gtaacttacg tgcctgttac cacattcaaa aatctacaga cagtcaatgt
      421 ggatgagaac taactgctga atgtcaaata aagttacaga attgcctccc caaaaaaaaa
      481 aaaaaaaa
//
