LOCUS       XM_006248287            1293 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus leukocyte surface antigen CD47-like
            (LOC100909977), transcript variant X1, mRNA.
ACCESSION   XM_006248287
VERSION     XM_006248287.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051346.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_006248287.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1293
                     /gene="LOC100909977"
                     /note="leukocyte surface antigen CD47-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:100909977"
                     /db_xref="RGD:6500618"
     CDS             96..998
                     /gene="LOC100909977"
                     /codon_start=1
                     /product="leukocyte surface antigen CD47-like isoform X1"
                     /protein_id="XP_006248349.1"
                     /db_xref="GeneID:100909977"
                     /db_xref="RGD:6500618"
                     /translation="MWPLLVALLLGSFHCGLAQLLFKNISSVKIDHCKNIVLIPCYVS
                     NLEAENINELFLKWKFGRNSDIIFVFDGYANKSAAFYKFSSAHIFPSEFLKGNASLNV
                     AKEEVKNGKYTCEVTELSREGQQTVDLQYTDGSLFTLKEHISIIILPFLTLILFWAQF
                     GILIQKYKSNPVNRKTIILFATGLLITIVVITGASLLIPGGFAKRKGYGFAFLTTPSV
                     IPVFLQYHKFKPAIGRTLHTVIMLTIIQAVGTVLTVAGLYHSSLDCVPRYGSILILGL
                     AIVALGELFGLIYMKCFDPLIEFQ"
ORIGIN      
        1 cagaccctgg aaaagaagcc acgaggtagt aacagttgag gtgggctggg agcgcgtgct
       61 cacagcagca gttcgaggtt aacaaccacc tccatatgtg gcccttgctg gtagcgctgc
      121 tgttaggttc ttttcactgt ggtttggcac agctattgtt taaaaatatt agctctgtga
      181 aaattgacca ttgcaagaac attgttctca ttccgtgcta tgtctccaac ctagaggcag
      241 aaaacatcaa tgaattattt ttgaagtgga aatttggacg taattcggat ataatttttg
      301 tctttgatgg atatgcaaac aaatctgctg cattttataa attttcaagt gcacatattt
      361 tcccctcaga atttctaaaa ggaaatgctt ctttgaacgt ggctaaggag gaagttaaaa
      421 atggaaaata cacatgcgaa gtgacagaat taagcagaga gggacaacag accgtggatc
      481 tacaatacac tgatggttca ttgtttactt taaaggaaca tatttccatt attattttgc
      541 catttttgac tctaattctg ttctgggcac agtttggtat tttaatacaa aaatataaat
      601 ccaaccctgt aaacaggaaa actattattt tatttgctac tggactattg atcaccatcg
      661 ttgtcattac tggagccagc cttttgatcc caggtggctt tgcaaaaagg aaaggctatg
      721 ggtttgcttt cctcactact ccttcagtga tacctgtatt tctccagtac cataagttta
      781 agccagcgat tgggaggact ctccataccg tgatcatgtt aaccatcatt caggcagtgg
      841 gcactgtact cactgtggcg ggactctatc acagttcatt agactgcgta ccaagatatg
      901 gctccatact aattttaggt ttggccatag tagctctagg agaattattt ggactaattt
      961 acatgaaatg ctttgaccca ctgattgaat ttcaataaga cttgaaagca caggctgcgt
     1021 cgtctttctt ccctactttg tctcagtagc tcacaaggaa tcctaaattc aacaatttct
     1081 agtcccgagc agtttgccag atgtgccaag catcattggg tcacctcgct tttctcatca
     1141 cttgcagcca actgatcgtt ctccaaggat actgttttct ctaagccagt gcggactaga
     1201 atgctgggtg aaggctagtt tgtagtctta ttgctttgta aaaaatgtca attcattgat
     1261 tgtaacagaa aacaataaaa acattaaaat aaa
//
