LOCUS       XM_039080416             564 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus peptidyl-prolyl cis-trans isomerase
            A-like (LOC100909955), mRNA.
ACCESSION   XM_039080416
VERSION     XM_039080416.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086025) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..564
                     /gene="LOC100909955"
                     /note="peptidyl-prolyl cis-trans isomerase A-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 43 Proteins"
                     /db_xref="GeneID:100909955"
                     /db_xref="RGD:6501070"
     CDS             1..564
                     /gene="LOC100909955"
                     /codon_start=1
                     /product="peptidyl-prolyl cis-trans isomerase A-like"
                     /protein_id="XP_038936344.1"
                     /db_xref="GeneID:100909955"
                     /db_xref="RGD:6501070"
                     /translation="MPEIIIFWRADIAVCCFSPLAAELVNPTVYFNITADGEPLGHVS
                     FELFADNVPKTAENFHALSTGEKGFGYKASSFHRIIPGFMCQGGNVTCHNGAGGRSIY
                     REKFEGEDVILKHTGPGILSMANDEPNTSGSQFFICTAKTEWLGGKGVVFEKAKDGMN
                     IVEAMERFGSRNGKTSKQITISGCGQC"
ORIGIN      
        1 atgcccgaaa ttatcatctt ttggagggca gacatcgctg tctgttgctt ttcgccactt
       61 gctgcagaac tggtcaaccc caccgtgtac ttcaacatca cggctgatgg agagcccttg
      121 ggccacgtct ccttcgagct gtttgcagac aacgttccaa agacagcaga aaactttcat
      181 gctctgagca ctggggagaa aggatttggc tataaggctt cctcctttca cagaattatt
      241 ccaggattca tgtgtcaggg tggtaacgtc acatgccata atggcgctgg cggcaggtcc
      301 atctacagag agaaatttga gggtgaggac gtcatcctga agcatacagg tcctggcatc
      361 ttgtccatgg caaatgatga acctaacaca agtggttccc agttttttat ctgcactgcc
      421 aagactgagt ggctcggtgg caagggtgtg gtctttgaga aggcgaaaga cggcatgaac
      481 attgtggaag ccatggagcg ttttgggtcc cggaatggca agaccagcaa gcagatcacc
      541 atttccggct gtggacaatg ctaa
//
