LOCUS       XM_039103685            2524 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus N-lysine methyltransferase SETD8-like
            (LOC100909949), mRNA.
ACCESSION   XM_039103685
VERSION     XM_039103685.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103685.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2524
                     /gene="LOC100909949"
                     /note="N-lysine methyltransferase SETD8-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 9 ESTs, 1 long SRA read, 15 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:100909949"
                     /db_xref="RGD:6501036"
     CDS             65..952
                     /gene="LOC100909949"
                     /codon_start=1
                     /product="N-lysine methyltransferase KMT5A-like"
                     /protein_id="XP_038959613.1"
                     /db_xref="GeneID:100909949"
                     /db_xref="RGD:6501036"
                     /translation="MSPNKCSGMRSPLQEENSVVHHEVKCPGKPLAGIYRKREEKRNA
                     GNVIRSAVKSEEQKSKDTRRGLLAPFPNQKPEATEPPKTPPPSCDSTSVAVAKQALKK
                     PLKGKQAPRKKSQGKTQQNRKLTDFYPVRRSSRKSKAELQSEERKKIDELIESGKEEG
                     MKIDLIDGKGRGVIATKRFSRGDFVVEYHGDLIEITDAKKREALYAQDPSTGCYMYYF
                     QYLSKTYCVDATQETNRPGRLINHSKCGNCQTKLHDIYGVPHLIFIASRDIAAGEELL
                     YDYGDRSKASIEAYPWLKH"
ORIGIN      
        1 tgacagagcg gggccatggc tagaggagaa cgtgtttgct gggcagtcaa agatctatgc
       61 ctacatgagt ccgaacaaat gctctggaat gcgttctcca ctgcaggaag agaactccgt
      121 cgtacatcat gaggtcaaat gcccggggaa accattggcc ggaatctaca ggaagcgaga
      181 agagaaaaga aacgctggga atgttatccg aagcgctgtg aagtcagaag aacagaagag
      241 caaagatacc aggagaggtc tcctggcgcc ttttccaaac caaaaacctg aagcaacaga
      301 acctccaaaa actccacccc cgtcatgtga ttctaccagt gtagcggttg ctaagcaagc
      361 cctgaaaaag cccctcaagg gcaagcaggc ccctcggaag aagtctcaag ggaagacaca
      421 gcagaataga aaactcacag atttctaccc cgtgcgaagg agctccagga agagcaaagc
      481 tgagctgcag tctgaagaaa ggaagaagat agatgagcta attgagagcg ggaaggaaga
      541 gggcatgaag attgatctaa tcgatggcaa aggcaggggt gtgattgcta ccaagcgatt
      601 ctcccgggga gactttgtgg tagaatacca tggagacctc attgaaatca ccgatgccaa
      661 gaagcgggag gctctgtacg cacaggaccc ctccacgggc tgctacatgt actattttca
      721 atatctgagc aaaacctact gcgtggatgc cactcaagaa acgaaccgcc cggggagact
      781 gatcaatcac agtaagtgtg ggaattgcca gaccaaactg catgacatct acggcgtgcc
      841 tcacctcatc ttcatagcct cccgagacat tgcagccggg gaggagctcc tgtacgacta
      901 tggagaccgg agcaaggcct ccatcgaagc ctacccttgg ctgaagcact aaccaaccat
      961 gtggcctccc tgcctccctg ccaccctgcc tccttcaaag gacaaagtgc cctcaaaggg
     1021 aaatgaattt tttacacaca cacacacaca cacacacaca cacacacaca cacacacaca
     1081 ctcactcact cttagctaat tacttcaaat gtttttaaaa agtatattaa agatgccttt
     1141 tcatgtagca tttaaatatc tgttacaggt ttccaaggtg gacttgaaca gatggcctta
     1201 tattaccaaa acttttatat tctagttgtt tttctacctt tttgcataca agctgaacgt
     1261 ttgtgcttcc cgcgcagtgt aagactcggc acaggtttta gagaatggag gtgaacatga
     1321 actaggaagc cgggctctgc ccaagatgaa agccaggact cccccgcacc ccacgtccgg
     1381 tgtgaggccg gtgtgagggt gctgccaccc ccacgcacag cctggacggg atgtctccaa
     1441 gctcttgttc tcctcaacgt cttgacaggt gtacacattg acgtgtatga atatttttta
     1501 gcaaaagttt cacagtaagc tagtcttccc ctctgctttc tccaaagctt actgagcccg
     1561 gggctcggag gcccggccag gaacagacct cttccacagg cttacggctt ttccaggcac
     1621 cttgaagcat cagggtgggc agtcagacta gaggcgggcc gggaaaagca ctgttctcct
     1681 gcccaagaag ggcaggtctc ctgaaactgc attaattctt tatagaaatg tgaacactga
     1741 atttatttta aaaaataata ataaaaaaaa caaaatagta aaaaaaaaat taaaaagaaa
     1801 aaaatggaaa aaaaaaccac agaaaacaac ttaacatgta tataggtttt gaagggagtg
     1861 aaatggatgc agttttcttt tcttctgggg ttgatttttc tttttggctt ggctggttgg
     1921 tttgtgtaga gaagatttga gatggtactc tattctaatc aaaagtgagg tttatagtgg
     1981 gagcagaaat tactaagccc acaccccctc cccaacccca attctgctac gtgggaagtt
     2041 ctctacctgc tgtcaaggca gaacccctgg tctcccgtga agatgccgtc agtcctgtgg
     2101 gcatcagaca ccagatgtgt ttggccctag ggtacctggc agcccgcaag gcttagcagc
     2161 cagagatcag gaggatcctt cagttgtaac ctgcgatagc aagagtaggc ttccttctcc
     2221 ctccttgggg aggactaacc attcaccttc agtccagggg gcctggggtt caggagccag
     2281 gtataagagc ctacccttgt ccccagtacc tccaactccc agcctcatga tggtgctacc
     2341 taagaaagtc ttccccgcac cctttgctag cccagtcagt ggtcagactt ggaggaggat
     2401 ccgacaggag ggtgtaactg tgagataaaa tgtcttggtt gtacctgttt gtggcttagc
     2461 tttgtattta aatagcaaac aaaaaaagga aataaacttg aaacttattt gtcatcttaa
     2521 aaaa
//
