LOCUS       XM_039090171             527 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus 40S ribosomal protein S20-like
            (LOC100909911), partial mRNA.
ACCESSION   XM_039090171
VERSION     XM_039090171.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086030) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            <1..527
                     /gene="LOC100909911"
                     /note="40S ribosomal protein S20-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 long SRA reads, 25 Proteins"
                     /db_xref="GeneID:100909911"
                     /db_xref="RGD:6500917"
     CDS             <1..483
                     /gene="LOC100909911"
                     /codon_start=1
                     /product="small ribosomal subunit protein uS10-like"
                     /protein_id="XP_038946099.1"
                     /db_xref="GeneID:100909911"
                     /db_xref="RGD:6500917"
                     /translation="LRSFPRPVVRAVEPCQVCCPNSPLFAPAEEQVGQEATYASATAF
                     KDTGKTPVEPEMAIHPIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTL
                     RITTRKTPCSEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA
                     "
     polyA_site      527
                     /gene="LOC100909911"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctgcgctcct ttccgagacc tgtggtgcgt gctgtggagc cttgtcaagt ctgctgtcct
       61 aactcaccgc tgttcgctcc tgctgaggaa caagtcggtc aggaagctac ctacgcctca
      121 gccacggcat ttaaagatac cgggaagact cccgtggagc ccgaaatggc gattcacccg
      181 attcgaatca cgctcaccag ccgcaacgtg aagtcgctgg aaaaggtttg tgcggacttg
      241 atcagaggcg caaaggaaaa gaatctgaaa gtgaaaggac cagtgcgcat gcctaccaag
      301 acactgagaa tcactaccag aaaaacccct tgcagtgaag gttccaagac gtgggatcgt
      361 ttccagatga gaatccacaa gcgactcatt gacttacaca gtccttcaga gattgttaag
      421 cagattactt ccatcagtat tgagcctgga gtggaggttg aagtcaccat tgcagatgcc
      481 taagtcaact gtttaaataa attgacttaa ttgttaaaaa aaaaaaa
//
