LOCUS       XM_039103567            4625 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 43-like
            (LOC100909688), transcript variant X1, mRNA.
ACCESSION   XM_039103567
VERSION     XM_039103567.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4625
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4625
                     /gene="LOC100909688"
                     /note="zinc finger protein 43-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 10 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 7 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:100909688"
                     /db_xref="RGD:6502425"
     CDS             1570..3195
                     /gene="LOC100909688"
                     /codon_start=1
                     /product="zinc finger protein 58-like isoform X1"
                     /protein_id="XP_038959495.1"
                     /db_xref="GeneID:100909688"
                     /db_xref="RGD:6502425"
                     /translation="MIIQVFIIAKELTQDLLSFTDVAIDFSPEECECLEPAQWNLYKE
                     VMLENYSNLLFLGLAFSKPYLVTFLEQSSDPWRVRRKASAAIHLGSKAHKCKECGKAF
                     DRNSVLIQHQRIHTGERPYKCEECGMAFTVRCILSKHQRIHTGEKPYKCKECGKAFSC
                     SSNLHQHQQIHREEKLYKCGECGKAFSCSSYLHRHQRIHTGMKPYKCKECGKAFNCSA
                     NLIYHQRIHTGEKPYKCGECGKAFTIYSTFMNHQRTHSGEKPYECKDCGKAFTNCYNL
                     IQHQRIHTGEKPYACEECGKSFNYSSHLKQHKRIHTGEKPYKCEVCGKAFNCSDYLVK
                     HQRIHTGEKPYKCEVCGKAFSFSTYLHKHQRIHTGEKRYRCEECGRAFTNYSGLIVHR
                     RVHTGEKPYKCEECGKAFSVHTSLSKHQRIHTREQPYKCDECGKRFNVHSAFSKHQIM
                     HTREKPYKCKHCDKTFKYPSPLVQHERIHTGERPYKCEVCGKAFTSSSNLKYHWRLHT
                     GEKPYKCEQCGKAFKNSSNVTRHYKIHARENPD"
ORIGIN      
        1 tctctctgct catgtttagc ccttcacagc cagtcctcca atttggactc aagtttctta
       61 ctaccctgct ggggttggat ctttgaggtg aaggttggtc caggttgccg tgcagcccac
      121 caggcctgag ggattgtgca gggtgggcag gtagttccat ctttgaagga gttgtcatgg
      181 ggcatctagg aagtagggag tgaaagaccc ccaaacttgg ggagactctc gctccagtca
      241 cgggttgagg tgcccccaag aaacgggagt agccagtctt gatgtaacag caagaggtag
      301 cgtttattaa cgagatcccg gaccgacatg tatctcacac aggagacaga ggaatcggcc
      361 ccgagcctct tcaggcatgg gtttatatag gagaagccag ggggtttcac gtgcttatca
      421 gcaagggaaa tgggtacaag gtctcatctg caagcagtac gtgcgggctg gggtgttctc
      481 aatatagtag aacgtcttat ctttatctgt agagcaggga gtccatccgt ccggatggcc
      541 cccttcctgg aacaatccct tgaccttgtt tttaggcttg gccgggcaca tctcaggcca
      601 gctctgtcct gtccccttat ctgctgttct tttgcagttt ttatgaagtt tttattttaa
      661 ctcttcagga gaacctctct ttggaggggc tgttctaacc aagctgggct actgagtcag
      721 gatttaaatc agcactgggg agagggcgac agcgacggtt ctgggagcag ccatcagtct
      781 gctgctgctt cagtccatcc aagaatctcc ttggcatgac tggtcggcgg ctgcctgccc
      841 cctgaagcct gctctctcag ggagctctct ttccagcttg gctgtggaaa atctgctcgc
      901 aactaagatg tttacagtaa agtttattaa actggtacta gctgactcac tcccatctag
      961 ctgtagtcag gtttctcagc aaaatgtttt actgttcttc agaccttaaa agacatcaaa
     1021 gaattcactc tgaggagagg ccctatgagt gtgaggaatg tggcaaagcc tttcccagtc
     1081 cttcagacgt tactcaacat gcaagaaccc ataagagaat gaagcaatat acctgtgacg
     1141 aatgtggcga gtgcgttact attcagacaa cattttctga cctccgtaaa attcgtcttg
     1201 agggaaatcc gtctgaatgt gagagatgtc gaaagacctt tcaaaggttc ttaatgtaaa
     1261 gcatgcaaga gtgttcagac agctatcctt cacatgggaa ggacatggca gatgttttat
     1321 gtatcattca gctgttgctc aaccacaagc aattcacacc tgagagaaac cctacacatg
     1381 tgcagaaaag gccgagggtt catttgttcc tcatgtctgt atgaacattg gagaattcat
     1441 tctgatgagg aagccttcaa aagcaatgtg tgcgacaagt cctttacctg ttcttcacac
     1501 cctaagtatc ccaaagactt catattgtcg agacactctc catgtacaaa cactatgcct
     1561 aagccttgaa tgataattca agtcttcatc atcgccaaag aattgacaca ggaccttctg
     1621 tcatttacag atgtggccat tgatttctct ccagaggagt gtgaatgtct ggagcctgct
     1681 cagtggaatt tgtataagga agtgatgttg gagaattaca gcaaccttct gttcctgggt
     1741 cttgctttct ctaagccata cctggtcacc tttctggaac aaagttcaga tccatggaga
     1801 gtgaggagaa aagcatcagc ggccatccat ctaggatcaa aagcccacaa atgtaaagaa
     1861 tgtgggaaag cctttgatag gaactcagtc cttatccaac atcaaagaat ccatactgga
     1921 gagagaccct acaaatgtga agaatgtggc atggccttta ctgttcgctg cattctttct
     1981 aagcaccagc gaatccatac tggagagaaa ccctataaat gtaaagaatg tggcaaagct
     2041 ttcagctgtt cttctaacct tcaccaacac caacaaattc acagggaaga gaaactctat
     2101 aaatgcggtg agtgtgggaa ggcctttagc tgttcttcat atctgcatag gcatcagcga
     2161 atccatactg gcatgaaacc ctacaaatgc aaggaatgtg gcaaggcctt taactgttct
     2221 gcaaacctta tttaccacca gagaattcat actggagaga agccatataa atgtggtgaa
     2281 tgtgggaaag cctttaccat ttactcaacg ttcatgaatc accagcgaac acatagtgga
     2341 gaaaaaccct atgagtgcaa agactgtggg aaagccttca ctaattgtta taatctaatt
     2401 caacaccaaa gaattcatac tggagagaaa ccctatgcat gtgaagaatg tggtaaatct
     2461 tttaactatt cttcccacct taaacaacac aaaagaatcc atactggaga gaaaccatat
     2521 aaatgtgaag tgtgtggcaa agcttttaac tgttctgatt atctggttaa gcatcaaaga
     2581 atccatactg gagagaaacc ctacaaatgt gaagtatgtg gcaaagcttt tagcttttct
     2641 acatatctgc ataagcatca acgaatccac actggagaga aacgctacag atgtgaagaa
     2701 tgtggccgag cttttactaa ttattcgggg cttattgttc accgaagagt tcatactgga
     2761 gagaaaccct acaaatgcga agaatgtggc aaggccttta gtgttcatac atcgctctct
     2821 aaacatcaga gaattcatac tagagagcaa ccttataaat gtgatgaatg tggaaagagg
     2881 tttaatgttc actcagcatt ctctaaacat cagataatgc atactagaga gaaaccctac
     2941 aaatgcaaac actgtgacaa gaccttcaaa tatccttcac cccttgtgca acatgaaaga
     3001 attcacactg gagagagacc ctacaaatgt gaagtatgtg gcaaggcctt tacttcttct
     3061 tcaaatctta aatatcattg gagacttcat actggcgaga agccttataa atgtgaacaa
     3121 tgtggtaaag cctttaaaaa tagttcaaat gttactcgac actacaaaat tcatgctaga
     3181 gaaaatccag attaatgcaa acactttcgc aaagcctttt gtaattgttc attcacaatt
     3241 cagtgctaaa gaatttatat aaaagaaaaa ccttaaaaat gaaaggaata agggaagacc
     3301 tttactaata gttcaaccca tattcaactt ccaccactgc atactagaga gatcttgtaa
     3361 tggtgaagaa ggtggccatg ttgaacattc tatacttagg gagtatcaaa atgttttaga
     3421 gaaactctag aaatacaggt aatgcaggaa cttctcgtta accatgagtg aattataacc
     3481 aaacgttata cgtgcaaatt gacttgggaa ggaacactga tcaaaaacca aactgataca
     3541 gtaaaaagca ctgtgtaaac agtgttgcaa cactttgccc atcatgtaga tcttaagaga
     3601 cataagggaa ttctatcata agagacaaat tccaggaact gtatagcatt agcaaactgc
     3661 caaatgctgc ttttaattcc tacataatta atgcagaact ctgaactcac caagaaatgt
     3721 ttggtgtgac agaaaagctc tttatagact ttggaatcat gcagataagt ttgtgaggac
     3781 atcagtatgt tataaattga gattataaca taagctcaat tttgaaaagt gaaaagatca
     3841 cagcaactag tgatttttat cagaagaaca aaactgagtc ctgaggtttc agagtctccc
     3901 ttccccccga agactacaaa tacatttttg gaatattaat tttaataact tttgtaaata
     3961 aaagtaagct gctcttaatg tattgtcagc attgtgttta gtattgcatt cctattttac
     4021 tatgtttttt tcttacaaag ttttacatac tttttttttt ttaaactaag gctaatattg
     4081 gctgtccacc tgacacacct aggaaggggg actcagctgc agtatcatct atcagattgg
     4141 cctgtgtgtg tgactgttac atattcttga gtgcagatga tgtagaagga tctagtcaac
     4201 tgtgggcaac acaatcccta agctgtggac ctgggctgta taagaaaggt acctgaaaat
     4261 gagaccagga gtgaatcagc aagtagcatt cctccaggat ctttgctcag gtttctgcct
     4321 taagtacctg ccttggactc ctgcaatgat ggactgtaat gtgtaaaatg aaatagacac
     4381 tttcttcccc aggtaggttt tgggtcgtgg ggtttatcaa agcaaagaaa caaatcagaa
     4441 cataaggacc taggtaacat tttaactact tattactggg aatttgtgag atatttattc
     4501 cgttcttaat gtgctttgag taatttgtag catattattt ttttatgtta tatcattatc
     4561 tactgataat tacttttatt tcatgtgttt tatacaaata aagttatgcc cctttttgac
     4621 tcttc
//
