LOCUS       XM_039080427            3368 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 709-like
            (LOC100909682), mRNA.
ACCESSION   XM_039080427
VERSION     XM_039080427.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080427.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3368
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3368
                     /gene="LOC100909682"
                     /note="zinc finger protein 709-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 1 long SRA read, 59 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 175 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:100909682"
                     /db_xref="RGD:6502389"
     CDS             683..2401
                     /gene="LOC100909682"
                     /codon_start=1
                     /product="zinc finger protein 431-like"
                     /protein_id="XP_038936355.1"
                     /db_xref="GeneID:100909682"
                     /db_xref="RGD:6502389"
                     /translation="MDAVTYEDVHVNFSHEEWALLDPSQKSLYRDVMLETYWNLTVIG
                     HKLEDHNVEEYCQRYRRHRRYNICHCGYKPCEHRGYGKNQYIFACNNFLQIYDRIQTE
                     EKPYGCNQCSKAFANFRSLRKHEQNHTREKPYECSQCSKAFPSRSSLQIHERTHTGEK
                     PYDCNECGKAFSTRSHLQIHKRTHTGEKPYDCNECGKAFARSSNLQIHKRSHTGEKPY
                     DCNECGKAFACRSHLQIHKRTHTGEKPYDCDECGKAFATRSHLQIHERTHTGEKPYKC
                     NQCGKAFIGRSHLQIHKRVHTGEKPYECNQCGKAFAYNSDLHRHEIIHTGEKPYGCNQ
                     CGKAFASRSSLRNHEEHHTLEKPYECTLCGKAFAFCSNLYIHARCHTGEKPYVCTQCG
                     KAFARRSHLHIHERIHAGEKPYECNQCGKAFLLRSSLQIHERTHTGEKPYVCNQCGKA
                     FARQSLLQIHERSHTGEKPYACNQCSKAFVCRSSLQMHERTHTGEKPYECNQCGKAFT
                     RRSLLQKHERSHSGEKPYECNQCGKAFASRSSLRNHEKHHTIEKPNEYNQCAKAFTSL
                     LPSSNI"
ORIGIN      
        1 tcattttttc atcctaggtc atcaccctgg aaccttccct ttggagacca taattgtgtt
       61 tctggtttca gaccagaaac ttttgatgct ctgcctccac ctcccaaaag gtggcatgaa
      121 aggccactgc caccacagaa ggctggaaaa gttagtattt ggccaacagt gtacagctga
      181 gagagatgcg agcaatccta agtgtgcctt attgaaattg ctgatgccta gtgaatatca
      241 gttcggtggc ttaaatttga cctgaatggg ctgggcgtcg tttcatttgt gagcaggagg
      301 atcacacagt gcacagagta accatctgtg tgtactagac accctatgcc tacccgaaga
      361 agtgcctact gtgtgcagaa atagtgcagc cacgactttg cagtgcgggc gcaagttcta
      421 cagttaatct ctgccggtcg tgctaggagg acagttgggc tgtgaaccac aaagctgtgt
      481 agctctgctc ctgtcactca ggtctcacta gccactcagg gcttggagac ggatgccagt
      541 tagaatgggg gcggatactt ccggtccacc atgctgcacg ctccgctgtg tttctgagag
      601 aagctttggt ggttccgggt tccgtggtga gtccggctgc taggagctgt gaggagagca
      661 gggcgagctg gggatccgcg ctatggatgc agtgacctat gaggatgtgc atgtgaactt
      721 cagtcatgaa gagtgggctt tgctggatcc ttcccagaag agtctctata gagatgtgat
      781 gttggaaacc tactggaacc tcactgttat tggtcacaaa ttggaagatc acaatgttga
      841 agaatactgt cagaggtata gaagacatag aaggtataac atctgtcatt gtggatacaa
      901 gccttgtgag catagggggt atggaaagaa ccaatatatc tttgcttgta acaattttct
      961 tcaaatatat gatagaatcc aaactgaaga gaaaccatat ggatgtaatc aatgcagtaa
     1021 agcttttgca aatttccgta gtcttcgaaa acatgaacaa aaccatacta gagaaaaacc
     1081 ttatgagtgt agtcaatgca gtaaagcctt tccgagtcgc agttctcttc aaatacatga
     1141 aagaactcat acgggagaga aaccctatga ctgtaatgaa tgtggtaaag ccttttcaac
     1201 tcgaagtcat cttcaaatac acaaaagaac tcatacagga gagaaaccat atgattgcaa
     1261 tgaatgtggt aaagcatttg cacgtagcag caatcttcaa atacacaaga gaagtcatac
     1321 aggagagaaa ccctatgatt gcaatgaatg tggtaaagcc tttgcatgtc gcagtcatct
     1381 tcaaatacac aaaagaactc atacgggaga gaaaccttat gattgtgatg aatgtggtaa
     1441 agcctttgca actcgcagtc atcttcaaat acatgaaaga actcacactg gagagaaacc
     1501 ttataaatgt aatcaatgcg gtaaagcctt tataggtcgc agtcatcttc aaatacataa
     1561 aagagtgcac actggagaga aaccttatga gtgtaatcag tgtggtaaag cttttgcata
     1621 taatagtgat cttcaccgac atgaaataat tcatacggga gagaaaccct atggatgtaa
     1681 tcagtgtggt aaagcctttg caagtcgtag tagtcttcga aatcatgagg aacatcatac
     1741 tcttgaaaaa ccgtatgaat gcactctatg tggtaaagcc tttgcatttt gcagtaatct
     1801 ttatatccat gcgagatgtc atactggaga gaaaccttat gtatgtactc agtgtggtaa
     1861 agcctttgca cgtcgcagtc accttcatat acatgaaagg attcatgctg gagagaaacc
     1921 ttatgagtgt aatcaatgtg gaaaagcttt tctacttcgc agtagtcttc aaatacatga
     1981 aagaactcat actggagaga aaccttatgt atgtaatcag tgcggtaaag cctttgcacg
     2041 tcagagtctt cttcaaatac atgaaagaag tcacactgga gagaaacctt atgcgtgtaa
     2101 tcagtgcagt aaggcctttg tatgtcgtag tagtcttcaa atgcatgaaa gaactcatac
     2161 tggagagaaa ccttatgaat gtaatcagtg tggcaaagcc ttcacacgtc gcagtcttct
     2221 ccagaaacat gaaagaagtc atagtggaga gaaaccttat gagtgtaatc agtgtggtaa
     2281 agcctttgca agtcgtagta gtcttcgaaa tcatgaaaaa catcatacta ttgagaaacc
     2341 taatgaatat aatcagtgtg ctaaagcgtt tacatctctc ctgccatctt caaatatatg
     2401 aaagaaacca cactggaaag aatttctgag tgtagtcaat gtagaaaatc ctttacaagt
     2461 cacagttacc ttcaaataca caaaagaaat cacagtggag agaaactgta tgaatgtact
     2521 cagtgtggta aagactgcat attggaatag tcttcataat tacagaatag gtcatactag
     2581 agaatcccca cgaatgtaac tgatgcagta aagctttgtc acattagtgt aatcttcagt
     2641 tcatcacaga actcacactg gagagaaacc ctatgatgaa atcaatggga taatgcctct
     2701 atatcttaga gtcttcttta aaggcatgaa agaattccta tggagagcaa caccatgaat
     2761 ctaatacatg cagtaagggc ttgtacaaca ggcatatttt tcctactgag tcatctcact
     2821 ggtgcttatg taagattaat agaaacattt tatccttaaa atccttttca gattgtaaac
     2881 aaattgtcac ccaagtgtag aagaacacag aaaaacttga ataataaaac atactttcaa
     2941 gagaaaatga tatttatact gccatccact tttatggatt atcttatttt attctgagga
     3001 acaaatactt gttcttaaca ccttatcaga accacaaatt agtccagaga atttcctcag
     3061 tgggtgaagg tagctgcaat taagcctgat gacctgagtt catcacctgg gagacccaca
     3121 gtacttatgg gagtttgttt tcctctctgc ttcctatgtg tactactgtt tctagtgtgt
     3181 accattgtat atgaagctag tggtctccaa catcaaaagg cctggtgatt ctgttgtggg
     3241 aaattttgtc atttgcaaag acagtgtgat caagctgcta aaaaggtctc agatctcaaa
     3301 atgtctggtg cattagttat gagaaatact gtactttgtt cagaaagcat ttgttcaggg
     3361 tcaaagca
//
