LOCUS       XM_039111097            2252 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus interferon alpha-1-like
            (LOC100909643), mRNA.
ACCESSION   XM_039111097
VERSION     XM_039111097.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2252
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2252
                     /gene="LOC100909643"
                     /note="interferon alpha-1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 39
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:100909643"
                     /db_xref="RGD:6502836"
     CDS             1317..1871
                     /gene="LOC100909643"
                     /codon_start=1
                     /product="interferon alpha-1-like"
                     /protein_id="XP_038967025.1"
                     /db_xref="GeneID:100909643"
                     /db_xref="RGD:6502836"
                     /translation="MAMVCAFLTILVVMSHWSTCCLGCDLPRTHNLTLLENMGRYSPV
                     SCLKDRKYFELPLEKVDAQQIQKSQAISLLQTVTKQILTLLESKESRATWDETLLDSF
                     CNYLYDHLRDLKDCQNQQVGEQEVPLTQEPSWWAVREYFGRITMYLKQKKHSPCAWEI
                     ARAEVWRALSYSDMFLAILSEEKE"
ORIGIN      
        1 tgtgtgtttg tccgtgttca tgtctcagtg ttgtatgtgt gaccatatac atgtaacaat
       61 gtccattttg tgtctctgtg tatatttgct tatgtatgtg agtatgtgta attgtgtatg
      121 tgagtgctta tctttgtatg tgtatgcgtg ggtgttgtgg gtatgtgtgt atagtgtgag
      181 tgtgtttgta tatttctgtg catctgtata taaaagtggg tctgtgtgcc tgtatatgca
      241 tgatgactga gtatgtgtaa atgtgtgttt gtgtcactgt gtgtgtatat gagtgagaga
      301 ggcagagaga gatagagata gagatagaga tagatagata gagagagaga gagagagaga
      361 gagagagaga gagagagaga gagagaaagg caagagaatg agacatactg agacaaagta
      421 gcacacaagg agaatgttta cccatttcct atgaatgtgg aggtcatagg ccaccttata
      481 ggtcttgact gtctactgca accctatgtt acagaaatcc aaccccgctt ataaaacttt
      541 ttcataagac tttttccaaa tacaaccctc aggatgccat gaaaatcatt ggctaaagag
      601 ctaatataca gtggtggcta tatttacctt catgaaaatt aatataaaga aaataacttt
      661 atttttagcc tttaaacaat ggaaaaattt gaagtatacc attatatcag tgtgatttct
      721 gtagagacag ggtttccctg tgtagtcttg acactcctgg aacttgctct gtagactagg
      781 ctggccttga accctgataa ccttttgcct gtagaatgca gccacaggcc acaataatat
      841 ttctaattta gaaagaattt tcaccatact ttacattttg atgaaaatat ttatgtcaat
      901 ggcataaaga agattaagaa ataatcgtaa atgacttaca ataattttta aatacaatca
      961 cagagaaagt tctgtgtttg caatagatgt gtaaatttct cataaagact acatatctga
     1021 agaatagtgg ttaatgataa tttacatgta atttaagaga aaccatgtag agtagctttc
     1081 tgagggtagc attgaaagag aaagcaatgg aggaacacaa atgcttgaga cacaagcaga
     1141 gagtgaggta aagaaagtga aaagagaatt gggaagctag gggagggcat tcagaaaggg
     1201 gaaagttgtg tttgccacta tttaagatag atgcacacag cagggttatc agagaaccta
     1261 caggggaaga ctcaaacaca ctgcccagag agccatcagc atctgcaaga tccgcaatgg
     1321 ctatggtttg tgcattcctc acgattctgg tagttatgag ccactggtca acctgctgtc
     1381 taggatgtga cctgcctcgc actcataacc tcacactcct ggaaaacatg ggtagatact
     1441 cccctgtttc ctgcctgaag gacagaaaat acttcgaatt acctttggag aaggtggatg
     1501 cccagcagat ccagaagtct caagccatct ctctcctgca aactgtgact aaacagatcc
     1561 tgaccctctt ggaatcaaag gagtcacgtg ctacttggga tgaaaccctc ctagactcat
     1621 tctgcaatta cctctatgac catcttagag acctcaaaga ctgtcagaat cagcaggttg
     1681 gagagcagga agttcccttg acccaggaac cctcctggtg ggctgtgagg gaatacttcg
     1741 gcaggatcac catgtacctg aaacagaaga aacacagccc gtgtgcctgg gaaattgcta
     1801 gagcagaagt ctggagagcc ctgtcttatt cagacatgtt cttggcaata ctgagtgaag
     1861 agaaggaatg agttctgaga catttggaga ggactctcct ggactagaac actgcatctc
     1921 acattatagt ctctccttaa aaagctctca ttactttcag tgtgaataca agcaacctgc
     1981 ctagacggtt cagcgatatt gagcaattat tttcaatatg taaaactgtt tttgtatctg
     2041 catccaattg gttatttatt tattagagta ttattaagat aatttaagat atttatacta
     2101 aatcttgcat tcttatattt taatatggca catgatcatt tgtaattaaa ttattttgta
     2161 tacaaataaa tttgctttgt aagacacttt ggattaatta atttgatatc tctttaacat
     2221 tatcaactat tttttttaca ttttttatta tt
//
