LOCUS       XM_039088726             907 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 40S ribosomal protein S3a-like
            (LOC100365839), mRNA.
ACCESSION   XM_039088726
VERSION     XM_039088726.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051346.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039088726.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..907
                     /gene="LOC100365839"
                     /note="40S ribosomal protein S3a-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 26 ESTs, 48 long SRA reads, 30 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:100365839"
                     /db_xref="RGD:2318248"
     CDS             59..853
                     /gene="LOC100365839"
                     /codon_start=1
                     /product="40S ribosomal protein S3a-like"
                     /protein_id="XP_038944654.1"
                     /db_xref="GeneID:100365839"
                     /db_xref="RGD:2318248"
                     /translation="MAVGKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNI
                     GKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVAFRKFKLITEDVQGKNCLTNFHG
                     MDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQ
                     VRQIRKKMMEIMTREVQTNDLKEVVSKLISDSIGKDIEKACQSIYPLHDVFVRKVKML
                     KKPKFELGKLMELHGEGGSSGKTTGDETGAKVERADGYEPPVQESV"
ORIGIN      
        1 tcgcattaag ttctcgagcg agttgtactt ccgccctttt ggctctcaga gcggcaccat
       61 ggcggtcggg aagaacaagc gcctgacgaa aggtggcaag aagggagcca agaagaaagt
      121 ggttgatcca ttttctaaga aagactggta tgatgtgaaa gctccagcaa tgttcaatat
      181 taggaacatc gggaaaacac tagttacaag gactcaagga accaaaattg catcagatgg
      241 cctcaagggt cgtgtgttcg aagtgagtct tgcagatcta cagaacgatg aagttgcatt
      301 tagaaagttc aagctaatta ctgaggatgt tcagggcaaa aactgtctga ctaacttcca
      361 tggcatggat cttacccggg acaaaatgtg ctccatggtc aaaaagtggc agaccatgat
      421 tgaagctcat gttgatgtga agacgaccga tgggtatttg ctccgacttt tctgtgttgg
      481 tttcactaag aaacgtaaca accagattag aaagacatcc tatgcgcagc accagcaggt
      541 ccgccagatc cgcaagaaga tgatggagat catgacccga gaagtgcaga caaatgactt
      601 gaaggaagta gttagtaaac tgatttcaga cagcattggg aaagacatag agaaggcttg
      661 ccagtccatc tatcctctcc atgatgtttt tgttaggaaa gtcaaaatgc tgaagaaacc
      721 caagtttgaa ttgggaaaac tcatggagct ccatggtgaa ggcggtagtt ctggcaaaac
      781 aactggtgat gagacaggtg ctaaggttga acgagctgat ggctatgaac caccagtcca
      841 agaatccgtt taaaatccag atttttaata gcgacaaata aaaagtccta tttgtgaaaa
      901 aaaaaaa
//
