LOCUS       XM_006253861             683 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus hypothetical LOC100364958
            (LOC100364958), transcript variant X1, mRNA.
ACCESSION   XM_006253861
VERSION     XM_006253861.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006253861.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006253861.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..683
                     /gene="LOC100364958"
                     /note="hypothetical LOC100364958; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 247 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:100364958"
                     /db_xref="RGD:2320008"
     CDS             231..611
                     /gene="LOC100364958"
                     /codon_start=1
                     /product="tubulin beta-4B chain-like isoform X1"
                     /protein_id="XP_006253923.1"
                     /db_xref="GeneID:100364958"
                     /db_xref="RGD:2320008"
                     /translation="MRLPSFQFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAG
                     NKYVPRAILVDLEPGTMDSVKSGPFSQIFRPDNFVFGMSSCSRRAAQLTHSLPSSRGL
                     YSSVCSIQLSLCPRDRKSWPNLCS"
ORIGIN      
        1 ctggagtgat agaaagcagc tgcctctgca gttctgggag atctgctgtg cccacttcct
       61 tctccaggct ccccctgcac cctgcatctg tggtcataat atggcgatgc actgcgcatt
      121 cccaagacct ctgcagcagc tgctgctgcc caaatacatg gaggccagca gcacactagg
      181 ctcttgcctg ctgtctgacc aagacctttc tgggtgacag tctaagtgtg atgcgattgc
      241 cttcgtttca gttttgggag gtgataagcg atgagcatgg catcgacccc actggcagtt
      301 accatggcga cagtgacttg cagctggaga gaatcaatgt gtactacaat gaagctgctg
      361 gcaacaaata tgtacctcgg gccatcctag tggacctgga gccaggcacc atggactcag
      421 tgaagtcggg accattcagc cagatcttca ggccagacaa ctttgtgttc ggtatgtcgt
      481 catgctctag gagagctgcc cagctgactc attcccttcc tagcagccgt gggctttaca
      541 gttctgtgtg cagcatccag ctgagcctgt gtcccaggga ccgcaagtcc tggcctaacc
      601 tatgcagctg acaagatcat gtctgtggtc actcttgaca gctcagaggg gagtgtgggt
      661 ctgtggaggc tgtgaaaggc ctc
//
