LOCUS       NM_001329884            1377 bp    mRNA    linear   ROD 28-DEC-2023
DEFINITION  Rattus norvegicus cathepsin Q like 1 (Ctsql1), mRNA.
ACCESSION   NM_001329884 XM_002725219 XM_008771462
VERSION     NM_001329884.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1377)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC107913.1.
            
            On or before Aug 4, 2016 this sequence version replaced
            XM_008771462.1, XM_002725219.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC107913.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1377
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p14"
     gene            1..1377
                     /gene="Ctsql1"
                     /gene_synonym="Ctsq; CtsQ2"
                     /note="cathepsin Q like 1"
                     /db_xref="GeneID:100364523"
                     /db_xref="RGD:2320837"
     exon            1..47
                     /gene="Ctsql1"
                     /gene_synonym="Ctsq; CtsQ2"
                     /inference="alignment:Splign:2.1.0"
     exon            48..181
                     /gene="Ctsql1"
                     /gene_synonym="Ctsq; CtsQ2"
                     /inference="alignment:Splign:2.1.0"
     CDS             56..1087
                     /gene="Ctsql1"
                     /gene_synonym="Ctsq; CtsQ2"
                     /note="cathepsin Q2; cathepsin Q-like; Ctsq protein-like"
                     /codon_start=1
                     /product="cathepsin Q like 1 precursor"
                     /protein_id="NP_001316813.1"
                     /db_xref="GeneID:100364523"
                     /db_xref="RGD:2320837"
                     /translation="MTPAVFLIILCVGVVSGASAFDLSLDVQWQEWKMKYEKLYSPEE
                     ELLKRVVWEENVKKIELHNRENSLGKNTYIMEINDFADLTDEEFKDMITGITLPINNT
                     MKSLWKRALGSSLPNSWYWRDALPKFVDWRKEGYVTHVRVQGRCNSCWAFPVVGAIEG
                     QMFKKTGKLTPLSVQNLVDCSKPQGNKGCRGGTTYNAFQYVLQNGGLESEATYPYEGK
                     EGLCRYNPNNSSAKITRFVALPENEDVLMDAVATKGPVAAGIHVVHSSLRFYKKGIYH
                     EPKCNNYVNHAVLVVGYGFEGNETDGNNYWLIQNSWGERWGLNGYMKIAKDRNNHCGI
                     ATFAQYPIV"
     exon            182..304
                     /gene="Ctsql1"
                     /gene_synonym="Ctsq; CtsQ2"
                     /inference="alignment:Splign:2.1.0"
     exon            305..484
                     /gene="Ctsql1"
                     /gene_synonym="Ctsq; CtsQ2"
                     /inference="alignment:Splign:2.1.0"
     exon            485..709
                     /gene="Ctsql1"
                     /gene_synonym="Ctsq; CtsQ2"
                     /inference="alignment:Splign:2.1.0"
     exon            710..872
                     /gene="Ctsql1"
                     /gene_synonym="Ctsq; CtsQ2"
                     /inference="alignment:Splign:2.1.0"
     exon            873..987
                     /gene="Ctsql1"
                     /gene_synonym="Ctsq; CtsQ2"
                     /inference="alignment:Splign:2.1.0"
     exon            988..1356
                     /gene="Ctsql1"
                     /gene_synonym="Ctsq; CtsQ2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gttcaatctg tggagtgagc agaggcagta gtggtcatca cagaaaggtt gagacatgac
       61 tcctgctgtc ttcctgatca tcctgtgcgt gggagttgtg tcaggtgctt cagcattcga
      121 tctcagtttg gatgtccaat ggcaagagtg gaagatgaaa tatgaaaaat tatatagtcc
      181 ggaggaagaa ctcctgaaga gagtagtatg ggaagaaaat gtgaaaaaga ttgaactgca
      241 taacagggag aattccttgg ggaagaatac ctatattatg gaaataaatg attttgctga
      301 cctgactgat gaagaattca aggatatgat aactggtatt acattgccaa ttaacaacac
      361 aatgaaaagt ctctggaaac gtgcacttgg tagttcttta cctaattctt ggtattggcg
      421 agatgctttg cccaaattcg ttgattggag aaaggaaggc tatgtgactc atgtgcgggt
      481 acagggacgg tgtaattctt gttgggcttt tcctgtggtt ggtgccatag aaggacaaat
      541 gttcaagaaa acaggcaaac tgaccccact gagtgtccag aatcttgtgg actgttctaa
      601 acctcaaggc aataaaggct gtcgtggagg tactacatac aatgcattcc agtatgtttt
      661 gcaaaatgga ggtttggagt ctgaggcaac ctatccatat gaaggaaaag aaggactatg
      721 caggtacaat cctaataatt catctgctaa aatcacaaga tttgtggccc tcccagaaaa
      781 tgaagatgtc ctaatggatg ctgtagcaac taaaggacct gttgctgccg gaattcatgt
      841 tgtccacagt tctttaaggt tctacaaaaa aggtatttat catgagccaa agtgcaacaa
      901 ttatgtgaat catgcagttc tcgtggtggg ctatggattt gagggaaacg aaacagatgg
      961 caataactac tggctgatcc agaacagctg gggtgaacga tggggactga atggatatat
     1021 gaagatcgcc aaagacagga acaaccactg tggaattgcc acatttgccc aataccctat
     1081 tgtgtgaaca gccttatgtc acaagaaagc atgtgccatg agactccatt tccagaggag
     1141 tgacatcagc ttcaatgaat ggcctttgat gaatacacta aaatcttgat ttgctcaaaa
     1201 ttctcattgt aatgtgaatt cttggagctt tcacgtattt gacacgagca ttataagttt
     1261 tgctttcagt aatgaatgct catgtttccc aaagtaactt tatttttact tttaatgctt
     1321 gagcaaataa aagcctttta aaaagaaaaa aaataaaaaa aaaaaaaaaa aaaaaaa
//
